Bender M A, Byron Rachel, Ragoczy Tobias, Telling Agnes, Bulger Michael, Groudine Mark
Division of Clinical Research, Fred Hutchinson Cancer Research Center, Seattle, WA 98109, USA.
Blood. 2006 Aug 15;108(4):1395-401. doi: 10.1182/blood-2006-04-014431. Epub 2006 Apr 27.
The locus control region (LCR) was thought to be necessary and sufficient for establishing and maintaining an open beta-globin locus chromatin domain in the repressive environment of the developing erythrocyte. However, deletion of the LCR from the endogenous locus had no significant effect on chromatin structure and did not silence transcription. Thus, the cis-regulatory elements that confer the open domain remain unidentified. The conserved DNaseI hypersensitivity sites (HSs) HS-62.5 and 3'HS1 that flank the locus, and the region upstream of the LCR have been implicated in globin gene regulation. The flanking HSs bind CCCTC binding factor (CTCF) and are thought to interact with the LCR to form a "chromatin hub" involved in beta-globin gene activation. Hispanic thalassemia, a deletion of the LCR and 27 kb upstream, leads to heterochromatinization and silencing of the locus. Thus, the region upstream of the LCR deleted in Hispanic thalassemia (upstream Hispanic region [UHR]) may be required for expression. To determine the importance of the UHR and flanking HSs for beta-globin expression, we generated and analyzed mice with targeted deletions of these elements. We demonstrate deletion of these regions alone, and in combination, do not affect transcription, bringing into question current models for the regulation of the beta-globin locus.
基因座控制区(LCR)被认为对于在发育中的红细胞的抑制环境中建立和维持开放的β-珠蛋白基因座染色质结构域是必要且充分的。然而,从内源性基因座中删除LCR对染色质结构没有显著影响,也不会使转录沉默。因此,赋予开放结构域的顺式调控元件仍然未知。位于该基因座两侧的保守DNaseI超敏位点(HSs)HS-62.5和3'HS1,以及LCR上游区域已被认为与珠蛋白基因调控有关。侧翼HSs结合CCCTC结合因子(CTCF),并被认为与LCR相互作用形成一个参与β-珠蛋白基因激活的“染色质枢纽”。西班牙型地中海贫血是LCR及其上游27 kb的缺失,导致该基因座的异染色质化和沉默。因此,西班牙型地中海贫血中缺失的LCR上游区域(上游西班牙区域[UHR])可能是表达所必需的。为了确定UHR和侧翼HSs对β-珠蛋白表达的重要性,我们构建并分析了靶向缺失这些元件的小鼠。我们证明单独或联合缺失这些区域不会影响转录,这对目前β-珠蛋白基因座调控模型提出了质疑。