• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

小鼠β-珠蛋白基因座控制区5'超敏位点5和6的描述及靶向缺失

Description and targeted deletion of 5' hypersensitive site 5 and 6 of the mouse beta-globin locus control region.

作者信息

Bender M A, Reik A, Close J, Telling A, Epner E, Fiering S, Hardison R, Groudine M

机构信息

Fred Hutchinson Cancer Research Center, Seattle, WA, USA.

出版信息

Blood. 1998 Dec 1;92(11):4394-403.

PMID:9834246
Abstract

The most upstream hypersensitive site (HS) of the beta-globin locus control region (LCR) in humans (5' HS 5) and chickens (5' HS 4) can act as an insulating element in some gain of function assays and may demarcate a beta-globin domain. We have mapped the most upstream HSs of the mouse beta-globin LCR and sequenced this region. We find that mice have a region homologous to human 5' HS 5 that is associated with a minor HS. In addition we map a unique HS upstream of 5' HS 5 and refer to this novel site as mouse 5' HS 6. We have also generated mice containing a targeted deletion of the region containing 5' HS 5 and 6. We find that after excision of the selectable marker in vivo, deletion of 5' HS 5 and 6 has a minimal effect on transcription and does not prevent formation of the remaining LCR HSs. Taken together these findings suggest that the most upstream HSs of the mouse beta-globin LCR are not necessary for maintaining the beta-globin locus in an active configuration or to protect it from a surrounding repressive chromatin environment.

摘要

人类β-珠蛋白基因座控制区(LCR)最上游的超敏位点(HS)(5' HS 5)和鸡的(5' HS 4)在某些功能获得性实验中可作为绝缘元件,并且可能界定一个β-珠蛋白结构域。我们已绘制出小鼠β-珠蛋白LCR最上游的HSs图谱并对该区域进行了测序。我们发现小鼠有一个与人类5' HS 5同源的区域,该区域与一个较小的HS相关。此外,我们在5' HS 5上游绘制了一个独特的HS,并将这个新位点称为小鼠5' HS 6。我们还构建了含有靶向缺失包含5' HS 5和6区域的小鼠。我们发现在体内切除选择标记后,5' HS 5和6的缺失对转录的影响最小,并且不会阻止其余LCR HSs的形成。综合这些发现表明,小鼠β-珠蛋白LCR最上游的HSs对于将β-珠蛋白基因座维持在活性状态或保护其免受周围抑制性染色质环境的影响并非必需。

相似文献

1
Description and targeted deletion of 5' hypersensitive site 5 and 6 of the mouse beta-globin locus control region.小鼠β-珠蛋白基因座控制区5'超敏位点5和6的描述及靶向缺失
Blood. 1998 Dec 1;92(11):4394-403.
2
Flanking HS-62.5 and 3' HS1, and regions upstream of the LCR, are not required for beta-globin transcription.位于HS-62.5和3' HS1侧翼以及LCR上游的区域对于β-珠蛋白转录并非必需。
Blood. 2006 Aug 15;108(4):1395-401. doi: 10.1182/blood-2006-04-014431. Epub 2006 Apr 27.
3
Cooperativeness of the higher chromatin structure of the beta-globin locus revealed by the deletion mutations of DNase I hypersensitive site 3 of the LCR.LCR的DNase I超敏位点3缺失突变揭示的β-珠蛋白基因座高级染色质结构的协同性
J Mol Biol. 2007 Jan 5;365(1):31-7. doi: 10.1016/j.jmb.2006.09.072. Epub 2006 Oct 3.
4
Reduced beta-globin gene expression in adult mice containing deletions of locus control region 5' HS-2 or 5' HS-3.成年小鼠中,含有位点控制区5' HS-2或5' HS-3缺失的β-珠蛋白基因表达降低。
Ann N Y Acad Sci. 1998 Jun 30;850:45-53. doi: 10.1111/j.1749-6632.1998.tb10461.x.
5
Hypersensitive site 2 specifies a unique function within the human beta-globin locus control region to stimulate globin gene transcription.超敏位点2在人类β-珠蛋白基因座控制区域内指定了一种独特功能,以刺激珠蛋白基因转录。
Mol Cell Biol. 1999 Apr;19(4):3062-72. doi: 10.1128/MCB.19.4.3062.
6
Deletion of the core region of 5' HS2 of the mouse beta-globin locus control region reveals a distinct effect in comparison with human beta-globin transgenes.删除小鼠β-珠蛋白基因座控制区5' HS2的核心区域后,与人类β-珠蛋白转基因相比,显示出明显不同的效应。
Blood. 2006 Jan 15;107(2):821-6. doi: 10.1182/blood-2005-06-2308. Epub 2005 Sep 27.
7
Independent formation of DnaseI hypersensitive sites in the murine beta-globin locus control region.小鼠β-珠蛋白基因座控制区中核酸酶I超敏位点的独立形成
Blood. 2000 Jun 1;95(11):3600-4.
8
A large upstream region is not necessary for gene expression or hypersensitive site formation at the mouse beta -globin locus.对于小鼠β-珠蛋白基因座的基因表达或超敏位点形成而言,大片上游区域并非必需。
Proc Natl Acad Sci U S A. 2000 Dec 19;97(26):14554-9. doi: 10.1073/pnas.97.26.14554.
9
[Identification and characterization of the rat beta-globin locus control region (LCR) site 1 and site 2].[大鼠β-珠蛋白基因座控制区(LCR)位点1和位点2的鉴定与特征分析]
Nihon Ika Daigaku Zasshi. 1996 Apr;63(2):127-39. doi: 10.1272/jnms1923.63.127.
10
Autonomous, erythroid-specific DNase I hypersensitive site formed by human beta-globin locus control region (LCR) 5' HS 2 in transgenic mice.人β-珠蛋白基因座控制区(LCR)5' HS 2在转基因小鼠中形成的自主性、红系特异性脱氧核糖核酸酶I超敏感位点。
Dev Biol. 1995 Jun;169(2):728-32. doi: 10.1006/dbio.1995.1182.

引用本文的文献

1
Enhancer redundancy in development and disease.增强子冗余在发育和疾病中的作用。
Nat Rev Genet. 2021 May;22(5):324-336. doi: 10.1038/s41576-020-00311-x. Epub 2021 Jan 12.
2
The interdependence of gene-regulatory elements and the 3D genome.基因调控元件与 3D 基因组的相互依存关系。
J Cell Biol. 2019 Jan 7;218(1):12-26. doi: 10.1083/jcb.201809040. Epub 2018 Nov 15.
3
LCR 5' hypersensitive site specificity for globin gene activation within the active chromatin hub.LCR5' 高敏位点特异性在活性染色质中心内的珠蛋白基因激活。
Nucleic Acids Res. 2012 Dec;40(22):11256-69. doi: 10.1093/nar/gks900. Epub 2012 Oct 4.
4
CTCF-mediated transcriptional regulation through cell type-specific chromosome organization in the β-globin locus.CTCF 通过β-珠蛋白基因座中细胞类型特异性染色体组织介导的转录调控。
Nucleic Acids Res. 2012 Sep;40(16):7718-27. doi: 10.1093/nar/gks536. Epub 2012 Jun 16.
5
Cohesin mediates chromatin interactions that regulate mammalian β-globin expression.黏连蛋白介导调节哺乳动物β-珠蛋白表达的染色质相互作用。
J Biol Chem. 2011 May 20;286(20):17870-8. doi: 10.1074/jbc.M110.207365. Epub 2011 Mar 29.
6
Cell type specificity of chromatin organization mediated by CTCF and cohesin.CTCF 和黏连蛋白介导的染色质组织的细胞类型特异性。
Proc Natl Acad Sci U S A. 2010 Feb 23;107(8):3651-6. doi: 10.1073/pnas.0912087107. Epub 2010 Feb 2.
7
Histone hyperacetylation within the beta-globin locus is context-dependent and precedes high-level gene expression.β-珠蛋白基因座内的组蛋白高度乙酰化是依赖于环境的,且先于高水平的基因表达。
Blood. 2009 Oct 15;114(16):3479-88. doi: 10.1182/blood-2009-03-210690. Epub 2009 Aug 18.
8
CTCF: master weaver of the genome.CTCF:基因组的主要编排者。
Cell. 2009 Jun 26;137(7):1194-211. doi: 10.1016/j.cell.2009.06.001.
9
Short-chain fatty acid-mediated effects on erythropoiesis in primary definitive erythroid cells.短链脂肪酸对原代定型红细胞生成的介导作用。
Blood. 2009 Jun 18;113(25):6440-8. doi: 10.1182/blood-2008-09-171728. Epub 2009 Apr 20.
10
CTCF-dependent enhancer-blocking by alternative chromatin loop formation.通过替代性染色质环形成实现的CTCF依赖性增强子阻断
Proc Natl Acad Sci U S A. 2008 Dec 23;105(51):20398-403. doi: 10.1073/pnas.0808506106. Epub 2008 Dec 12.