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从土壤到基因组学:链霉菌染色体

Soil to genomics: the Streptomyces chromosome.

作者信息

Hopwood David A

机构信息

Department of Molecular Microbiology, John Innes Centre, Colney, Norwich, NR4 7UH, United Kingdom.

出版信息

Annu Rev Genet. 2006;40:1-23. doi: 10.1146/annurev.genet.40.110405.090639.

Abstract

The 8-9-Mb Streptomyces chromosome is linear, with a "core" containing essential genes and "arms" carrying conditionally adaptive genes that can sustain large deletions in the laboratory. Bidirectional chromosome replication from a central oriC is completed by "end-patching," primed from terminal proteins covalently bound to the free 5'-ends. Plasmid-mediated conjugation involves movement of double-stranded DNA by proteins resembling other bacterial motor proteins, probably via hyphal tip fusion, mediated by these transfer proteins. Circular plasmids probably transfer chromosomes by transient integration, but linear plasmids may lead the donor chromosome end-first into the recipient by noncovalent association of ends. Transfer of complete chromosomes may be the rule. The recipient mycelium is colonized by intramycelial spreading of plasmid copies, under the control of plasmid-borne "spread" genes. Chromosome partition into prespore compartments of the aerial mycelium is controlled in part by actin- and tubulin-like proteins, resembling MreB and FtsZ of other bacteria.

摘要

800 - 900万碱基对的链霉菌染色体是线性的,有一个包含必需基因的“核心”和携带条件适应性基因的“臂”,这些基因在实验室中能承受大的缺失。从中央oriC开始的双向染色体复制通过“末端修补”完成,由与游离5'端共价结合的末端蛋白引发。质粒介导的接合涉及双链DNA通过类似于其他细菌运动蛋白的蛋白质移动,可能通过这些转移蛋白介导的菌丝顶端融合。环状质粒可能通过瞬时整合转移染色体,但线性质粒可能通过末端的非共价结合将供体染色体末端先导入受体。完整染色体的转移可能是常态。在质粒携带的“扩散”基因控制下,受体菌丝体通过质粒拷贝在菌丝内扩散而定殖。染色体分配到气生菌丝的前孢子区室部分受肌动蛋白和微管蛋白样蛋白控制,类似于其他细菌的MreB和FtsZ。

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