Streaker Emily D, Beckett Dorothy
Department of Chemistry & Biochemistry and Center for Biological Structure and Organization, University of Maryland, College Park, 20742, USA.
Protein Sci. 2006 Aug;15(8):1928-35. doi: 10.1110/ps.062187306. Epub 2006 Jul 5.
Enzyme-catalyzed addition of biotin to proteins is highly specific. In any single organism one or a small number of proteins are biotinylated and only a single lysine on each of these proteins is modified. A detailed understanding of the structural basis for the selective biotinylation process has not yet been elucidated. Recently certain mutants of the Escherichia coli biotin protein ligase have been shown to mediate "promiscuous" biotinylation of proteins. It was suggested that the reaction involved diffusion of a reactive activated biotin intermediate, biotinoyl-5'-AMP, with nonspecific proteins. In this work the reactivity of this chemically synthesized intermediate toward the natural target of enzymatic biotinylation, the biotin carboxyl carrier protein, was investigated. The results indicate that the intermediate does, indeed, react with target protein, albeit at a significantly slower rate than the enzyme-catalyzed process. Surprisingly, analysis of the products of nonenzymatic biotinylation indicates that of five lysine residues in the protein only the physiological target side chain is modified. These results indicate that either the environment of this lysine residue or its intrinsic properties render it highly reactive to nonenzymatic biotinylation mediated by biotinoyl-5'-AMP. This reactivity may be important for its selective biotinylation in vivo.
酶催化的蛋白质生物素化反应具有高度特异性。在任何一种生物体中,一种或少数几种蛋白质会被生物素化,并且这些蛋白质中的每一种只有一个赖氨酸残基会被修饰。目前尚未阐明选择性生物素化过程的结构基础的详细情况。最近,已证明大肠杆菌生物素蛋白连接酶的某些突变体可介导蛋白质的“混杂”生物素化。有人提出,该反应涉及反应性活化生物素中间体生物素酰-5'-AMP与非特异性蛋白质的扩散。在这项工作中,研究了这种化学合成的中间体对酶促生物素化的天然靶标生物素羧基载体蛋白的反应性。结果表明,该中间体确实能与靶蛋白发生反应,尽管反应速率比酶催化过程慢得多。令人惊讶的是,对非酶促生物素化产物的分析表明,该蛋白质的五个赖氨酸残基中只有生理靶标侧链被修饰。这些结果表明,要么是这个赖氨酸残基的环境,要么是其内在特性使其对生物素酰-5'-AMP介导的非酶促生物素化具有高反应性。这种反应性可能对其在体内的选择性生物素化很重要。