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间日疟原虫的遗传多样性:微卫星长度至关重要。

Plasmodium vivax genetic diversity: microsatellite length matters.

作者信息

Russell Bruce, Suwanarusk Rossarin, Lek-Uthai Usa

机构信息

International Health Program, Infectious Diseases Division, Menzies School of Health Research and Charles Darwin University, Darwin, Northern Territory 0811, Australia.

出版信息

Trends Parasitol. 2006 Sep;22(9):399-401. doi: 10.1016/j.pt.2006.06.013. Epub 2006 Jul 11.

Abstract

The Plasmodium vivax genome is very diverse but has a relatively low abundance of microsatellites. Leclerc et al. had shown that these di-nucleotide repeats have a low level of polymorphism, suggesting a recent bottleneck event in the evolutionary history of P. vivax. By contrast, in a recent paper, Imwong et al. show that there is a very high level of microsatellite diversity. The difference in these results is probably due to the set array lengths chosen by each group. Longer arrays are more diverse than are shorter ones because slippage mutations become exponentially more common with an increase in array length. These studies highlight the need to consider carefully the application and design of studies involving microsatellites.

摘要

间日疟原虫的基因组非常多样,但微卫星的丰度相对较低。勒克莱尔等人已表明,这些二核苷酸重复序列具有较低水平的多态性,这表明间日疟原虫进化史上近期发生了瓶颈事件。相比之下,在最近一篇论文中,伊姆翁等人表明微卫星多样性水平非常高。这些结果的差异可能是由于每组选择的序列阵列长度不同。较长的阵列比较短的阵列更多样化,因为随着阵列长度增加,滑动突变会呈指数级变得更常见。这些研究凸显了仔细考虑涉及微卫星的研究的应用和设计的必要性。

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