Hirota T, Hasegawa K, Obara K, Matsuda A, Akahoshi M, Nakashima K, Shirakawa T, Doi S, Fujita K, Suzuki Y, Nakamura Y, Tamari M
Laboratory for Genetics of Allergic Diseases, SNP Research Center, The Institute of Physical and Chemical Research (RIKEN), Yokohama, Japan.
Clin Exp Allergy. 2006 Jul;36(7):884-91. doi: 10.1111/j.1365-2222.2006.02522.x.
ADAM33, a member of the ADAM (a disintegrin and metalloprotease) family, is a putative asthma susceptibility gene recently identified by positional cloning. It is important to know whether the association exists in ethnically diverse populations.
To assess whether genetic functional variants of ADAM33 relate to the susceptibility or some phenotypes in adult patients with bronchial asthma in a Japanese population.
We searched for single nucleotide polymorphisms (SNPs) in ADAM33 by PCR-directed sequencing and identified 48 SNPs. Fourteen SNPs were selected with regard to the LD pattern, and genotyped by Taq-Man and PCR-RFLP methods. We conducted an association study of ADAM33 with 504 adult asthmatic patients and 651 controls, and haplotype analyses of related variants were performed.
Significant associations with asthma were found for the SNPs T1 (Met764Thr), T2 (Pro774Ser), S2 and V-3 (with the lowest P-value for T1, P = 0.0015; OR 0.63). We analysed the haplotype using these four polymorphisms, and found a positive association with haplotype CCTG (P = 0.0024).
Our results replicate associations reported recently in other ethnic populations, and suggest that the ADAM33 gene is involved in the development of asthma through genetic polymorphisms.
ADAM33是ADAM(一种解整合素和金属蛋白酶)家族的成员,是最近通过定位克隆鉴定出的一个推测的哮喘易感基因。了解这种关联在不同种族人群中是否存在很重要。
评估ADAM33的基因功能变异是否与日本人群中成年支气管哮喘患者的易感性或某些表型相关。
我们通过PCR定向测序在ADAM33中搜索单核苷酸多态性(SNP),并鉴定出48个SNP。根据连锁不平衡模式选择了14个SNP,并通过Taq-Man和PCR-RFLP方法进行基因分型。我们对504名成年哮喘患者和651名对照进行了ADAM33的关联研究,并对相关变异进行了单倍型分析。
发现SNP T1(Met764Thr)、T2(Pro774Ser)、S2和V-3与哮喘有显著关联(T1的P值最低,P = 0.0015;OR 0.63)。我们使用这四个多态性分析了单倍型,发现与单倍型CCTG呈正相关(P = 0.0024)。
我们的结果重复了最近在其他种族人群中报道的关联,并表明ADAM33基因通过基因多态性参与哮喘的发生发展。