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非天然阴离子配体结合和反应性在 Fe(II)-和 α-酮戊二酸依赖的加氧酶,SadA 的工程变体中。

Non-Native Anionic Ligand Binding and Reactivity in Engineered Variants of the Fe(II)- and α-Ketoglutarate-Dependent Oxygenase, SadA.

机构信息

Department of Chemistry, Indiana University, Bloomington, Indiana 47405, United States.

Department of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, United States.

出版信息

Inorg Chem. 2022 Sep 12;61(36):14477-14485. doi: 10.1021/acs.inorgchem.2c02872. Epub 2022 Aug 31.

Abstract

Mononuclear non-heme Fe(II)- and α-ketoglutarate-dependent oxygenases (FeDOs) catalyze a site-selective C-H hydroxylation. Variants of these enzymes in which a conserved Asp/Glu residue in the Fe(II)-binding facial triad is replaced by Ala/Gly can, in some cases, bind various anionic ligands and catalyze non-native chlorination and bromination reactions. In this study, we explore the binding of different anions to an FeDO facial triad variant, SadX, and the effects of that binding on HO vs X rebound. We establish not only that chloride and bromide enable non-native halogenation reactions but also that all anions investigated, including azide, cyanate, formate, and fluoride, significantly accelerate and influence the site selectivity of SadX hydroxylation catalysis. Azide and cyanate also lead to the formation of products resulting from N, NCO, and OCN rebound. While fluoride rebound is not observed, the rate acceleration provided by this ligand leads us to calculate barriers for HO and F rebound from a putative Fe(III)(OH)(F) intermediate. These calculations suggest that the lack of fluorination is due to the relative barriers of the HO and F rebound transition states rather than an inaccessible barrier for F rebound. Together, these results improve our understanding of the FeDO facial triad variant tolerance of different anionic ligands, their ability to promote rebound involving these ligands, and inherent rebound preferences relative to HO that will aid efforts to develop non-native catalysis using these enzymes.

摘要

单核非血红素 Fe(II) 和 α-酮戊二酸依赖性加氧酶 (FeDOs) 催化选择性 C-H 羟化反应。这些酶的变体中,Fe(II)结合面三角中的保守 Asp/Glu 残基被 Ala/Gly 取代后,可以结合各种阴离子配体,并催化非天然的氯化和溴化反应。在本研究中,我们探索了不同阴离子与 FeDO 面三角变体 SadX 的结合,以及这种结合对 HO 与 X 回弹的影响。我们不仅确定了氯离子和溴离子能够实现非天然卤化反应,而且还发现所有研究的阴离子,包括叠氮化物、异氰酸根、甲酸盐和氟化物,都显著加速和影响了 SadX 羟化催化的位点选择性。叠氮化物和异氰酸根还导致形成了来自 N、NCO 和 OCN 回弹的产物。虽然没有观察到氟离子的回弹,但该配体提供的速率加速使我们能够从假定的 Fe(III)(OH)(F) 中间计算 HO 和 F 回弹的壁垒。这些计算表明,缺乏氟化是由于 HO 和 F 回弹过渡态的相对壁垒,而不是 F 回弹的不可达壁垒。总之,这些结果提高了我们对 FeDO 面三角变体对不同阴离子配体的耐受性、它们促进涉及这些配体的回弹的能力以及相对于 HO 的固有回弹偏好的理解,这将有助于使用这些酶开发非天然催化的努力。

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