• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

一种在玻璃体冷冻切片上沉积基准标记物用于细胞断层扫描的方法。

A procedure to deposit fiducial markers on vitreous cryo-sections for cellular tomography.

作者信息

Masich Sergej, Ostberg Tove, Norlén Lars, Shupliakov Oleg, Daneholt Bertil

机构信息

Department of Cell and Molecular Biology, Karolinska Institutet, Box 285, SE-17177 Stockholm, Sweden.

出版信息

J Struct Biol. 2006 Dec;156(3):461-8. doi: 10.1016/j.jsb.2006.05.010. Epub 2006 Jun 8.

DOI:10.1016/j.jsb.2006.05.010
PMID:16859924
Abstract

We describe a novel approach for the accurate alignment of images in electron tomography of vitreous cryo-sections. Quantum dots, suspended in organic solvents at cryo-temperatures, are applied directly onto the sections and are subsequently used as fiducial markers to align the tilt series. Data collection can be performed from different regions of the vitreous sections, even when the sections touch the grid only at a few places. We present high-resolution tomograms of some organelles in cryo-sections of human skin cells using this method. The average error in image alignment was about 1nm and the resolution was estimated to be 5-7nm. Thus, the use of section-attached quantum dots as fiducial markers in electron tomography of vitreous cryo-sections facilitates high-resolution in situ 3D imaging of organelles and macromolecular complexes in their native hydrated state.

摘要

我们描述了一种用于玻璃体冷冻切片电子断层扫描中图像精确对齐的新方法。在低温下悬浮于有机溶剂中的量子点被直接应用于切片上,随后用作基准标记来对齐倾斜序列。即使切片仅在少数地方接触网格,也可以从玻璃体切片的不同区域进行数据采集。我们使用这种方法展示了人类皮肤细胞冷冻切片中一些细胞器的高分辨率断层扫描图。图像对齐的平均误差约为1nm,分辨率估计为5 - 7nm。因此,在玻璃体冷冻切片的电子断层扫描中使用附着在切片上的量子点作为基准标记,有助于对处于天然水合状态的细胞器和大分子复合物进行高分辨率原位三维成像。

相似文献

1
A procedure to deposit fiducial markers on vitreous cryo-sections for cellular tomography.一种在玻璃体冷冻切片上沉积基准标记物用于细胞断层扫描的方法。
J Struct Biol. 2006 Dec;156(3):461-8. doi: 10.1016/j.jsb.2006.05.010. Epub 2006 Jun 8.
2
Electron tomography of vitreous sections from cultured mammalian cells.培养的哺乳动物细胞玻璃体切片的电子断层扫描
J Struct Biol. 2008 Mar;161(3):384-92. doi: 10.1016/j.jsb.2007.10.008. Epub 2007 Oct 26.
3
Alignator: a GPU powered software package for robust fiducial-less alignment of cryo tilt-series.Alignator:一款基于 GPU 的软件包,用于对冷冻倾转系列进行强大的无基准标记配准。
J Struct Biol. 2010 Apr;170(1):117-26. doi: 10.1016/j.jsb.2010.01.014. Epub 2010 Feb 1.
4
Cryo-electron microscopy of vitreous sections of native biological cells and tissues.天然生物细胞和组织玻璃切片的冷冻电子显微镜观察。
J Struct Biol. 2004 Oct;148(1):131-5. doi: 10.1016/j.jsb.2004.03.010.
5
Improving the technique of vitreous cryo-sectioning for cryo-electron tomography: electrostatic charging for section attachment and implementation of an anti-contamination glove box.改进用于冷冻电镜断层扫描的玻璃切片技术:用于切片附着的静电充电和防污染手套箱的实现。
J Struct Biol. 2010 Feb;169(2):219-25. doi: 10.1016/j.jsb.2009.10.001. Epub 2009 Oct 12.
6
Molecular cryo-electron tomography of vitreous tissue sections: current challenges.玻璃体组织切片的分子冷冻电子断层扫描:当前挑战
J Microsc. 2009 Sep;235(3):293-307. doi: 10.1111/j.1365-2818.2009.03219.x.
7
Markov random field based automatic image alignment for electron tomography.基于马尔可夫随机场的电子断层扫描自动图像配准
J Struct Biol. 2008 Mar;161(3):260-75. doi: 10.1016/j.jsb.2007.07.007. Epub 2007 Jul 28.
8
Exploring skin structure using cryo-electron microscopy and tomography.利用冷冻电子显微镜和断层扫描技术探索皮肤结构。
Eur J Dermatol. 2008 May-Jun;18(3):279-84. doi: 10.1684/ejd.2008.0387. Epub 2008 May 13.
9
Computational exploration of structural information from cryo-electron tomograms.来自冷冻电子断层扫描的结构信息的计算探索。
Curr Opin Struct Biol. 2004 Jun;14(3):325-31. doi: 10.1016/j.sbi.2004.04.003.
10
Pros and cons: cryo-electron microscopic evaluation of block faces versus cryo-sections from frozen-hydrated skin specimens prepared by different techniques.利弊:通过不同技术制备的冷冻水合皮肤标本的块面与冷冻切片的冷冻电子显微镜评估
J Microsc. 2007 Feb;225(Pt 2):201-7. doi: 10.1111/j.1365-2818.2007.01732.x.

引用本文的文献

1
fiducial markers for 3D correlative cryo-fluorescence and FIB-SEM imaging.用于三维相关冷冻荧光和聚焦离子束扫描电子显微镜成像的基准标记
iScience. 2021 Jun 10;24(7):102714. doi: 10.1016/j.isci.2021.102714. eCollection 2021 Jul 23.
2
Three-dimensional organization of the cytoskeleton: A cryo-electron tomography perspective.细胞骨架的三维组织:冷冻电子断层扫描透视。
Protein Sci. 2020 Jun;29(6):1302-1320. doi: 10.1002/pro.3858.
3
Advances in Cryo-Correlative Light and Electron Microscopy: Applications for Studying Molecular and Cellular Events.
冷冻关联光镜与电子显微镜技术的新进展:在研究分子和细胞事件中的应用。
Protein J. 2019 Dec;38(6):609-615. doi: 10.1007/s10930-019-09856-1.
4
Label-free 3D-CLEM Using Endogenous Tissue Landmarks.使用内源性组织标志物的无标记三维细胞电子显微镜技术
iScience. 2018 Aug 31;6:92-101. doi: 10.1016/j.isci.2018.07.012. Epub 2018 Jul 20.
5
Fluorescently Labelled Silica Coated Gold Nanoparticles as Fiducial Markers for Correlative Light and Electron Microscopy.荧光标记的硅涂层金纳米颗粒作为光镜和电镜相关研究的基准标记物。
Sci Rep. 2018 Sep 11;8(1):13625. doi: 10.1038/s41598-018-31836-1.
6
Cryo-FIB specimen preparation for use in a cartridge-type cryo-TEM.用于盒式冷冻透射电子显微镜的冷冻聚焦离子束标本制备
J Struct Biol. 2017 Aug;199(2):114-119. doi: 10.1016/j.jsb.2017.05.011. Epub 2017 May 27.
7
Whole-body tissue stabilization and selective extractions via tissue-hydrogel hybrids for high-resolution intact circuit mapping and phenotyping.通过组织-水凝胶杂化体实现全身组织稳定化和选择性提取,用于高分辨率完整回路映射和表型分析。
Nat Protoc. 2015 Nov;10(11):1860-1896. doi: 10.1038/nprot.2015.122. Epub 2015 Oct 22.
8
Correlated light and electron microscopy: ultrastructure lights up!相关光镜和电镜:超微结构点亮!
Nat Methods. 2015 Jun;12(6):503-13. doi: 10.1038/nmeth.3400.
9
High-resolution cryo-electron microscopy on macromolecular complexes and cell organelles.对大分子复合物和细胞器进行高分辨率冷冻电子显微镜观察。
Protoplasma. 2014 Mar;251(2):417-27. doi: 10.1007/s00709-013-0600-1. Epub 2014 Jan 5.
10
3D structure determination of native mammalian cells using cryo-FIB and cryo-electron tomography.利用冷冻断裂纤维术和冷冻电镜断层成像术对天然哺乳动物细胞进行 3D 结构测定。
J Struct Biol. 2012 Nov;180(2):318-26. doi: 10.1016/j.jsb.2012.07.003. Epub 2012 Jul 14.