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一种用于分析叶绿体启动子的体外转录终止系统:菠菜atpB基因多个启动子的鉴定

An in vitro transcription termination system to analyze chloroplast promoters: identification of multiple promoters for the spinach atpB gene.

作者信息

Chen L J, Rogers S A, Bennett D C, Hu M C, Orozco E M

机构信息

Department of Agronomy, University of Illinois.

出版信息

Curr Genet. 1990 Jan;17(1):55-64. doi: 10.1007/BF00313249.

DOI:10.1007/BF00313249
PMID:1690085
Abstract

Promoters for spinach chloroplast genes were cloned 5' to a strong factor-independent transcription terminator from E. coli. These "minigene" constructions were transcribed in vitro by a transcriptionally active extract of spinach chloroplasts. Transcription of supercoiled DNA templates resulted in synthesis of discretely-sized RNAs that were readily quantifiable. The efficiency of transcription was up to 3.5 RNAs per template. The transcription termination system described in this report was used to identify the primary transcripts for the plastid atpB gene. Four in vivo transcripts for the atpB gene have been previously identified with 5' untranslated leaders of approximately 455, 275, 180 and 100 nucleotides, respectively. In this report we show that the "-455", "-275" and "-180" regions function as chloroplast promoters in vitro. In addition, a fourth promoter was found that yields a primary transcript totally lacking an untranslated leader.

摘要

菠菜叶绿体基因的启动子被克隆到来自大肠杆菌的一个强的不依赖因子的转录终止子的5'端。这些“小基因”构建体在体外由菠菜叶绿体的转录活性提取物进行转录。超螺旋DNA模板的转录导致了大小离散的RNA的合成,这些RNA易于定量。转录效率高达每个模板3.5个RNA。本报告中描述的转录终止系统被用于鉴定质体atpB基因的初级转录本。先前已鉴定出atpB基因的四种体内转录本,其5'非翻译前导序列分别约为455、275、180和100个核苷酸。在本报告中,我们表明“-455”、“-275”和“-180”区域在体外作为叶绿体启动子起作用。此外,还发现了第四个启动子,它产生的初级转录本完全没有非翻译前导序列。

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An in vitro transcription termination system to analyze chloroplast promoters: identification of multiple promoters for the spinach atpB gene.一种用于分析叶绿体启动子的体外转录终止系统:菠菜atpB基因多个启动子的鉴定
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引用本文的文献

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本文引用的文献

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Synthesis of the large subunit of ribulose-1,5-bisphosphate carboxylase in anin vitro partially definedE. coli system.在体外部分定义的大肠杆菌系统中合成核酮糖-1,5-二磷酸羧化酶大亚基。
Plant Mol Biol. 1983 Sep;2(5):279-90. doi: 10.1007/BF01578646.
2
Chloroplast RNA polymerase from spinach: purification and DNA-binding proteins.菠菜叶绿体 RNA 聚合酶:纯化与 DNA 结合蛋白。
Plant Mol Biol. 1983 Mar;2(2):67-74. doi: 10.1007/BF01595167.
3
Multiple transcripts for higher plantrbcL andatpB genes and localization of the transcription initiation site of therbcL gene.
烟草和其他高等植物中由多亚基RNA聚合酶识别的质体核糖体RNA操纵子启动子的独特结构。
Plant Cell. 2003 Jan;15(1):195-205. doi: 10.1105/tpc.007914.
4
Transcription termination at the Escherichia coli thra terminator by spinach chloroplast RNA polymerase in vitro is influenced by downstream DNA sequences.菠菜叶绿体RNA聚合酶在体外对大肠杆菌thra终止子的转录终止受到下游DNA序列的影响。
Nucleic Acids Res. 1995 Nov 25;23(22):4690-7. doi: 10.1093/nar/23.22.4690.
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EMBO J. 1993 Apr;12(4):1505-12. doi: 10.1002/j.1460-2075.1993.tb05794.x.
6
3'end maturation of the Chlamydomonas reinhardtii chloroplast atpB mRNA is a two-step process.莱茵衣藻叶绿体atpB mRNA的3'末端成熟是一个两步过程。
Mol Cell Biol. 1993 Apr;13(4):2277-85. doi: 10.1128/mcb.13.4.2277-2285.1993.
7
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Plant Mol Biol. 1993 Jul;22(4):645-58. doi: 10.1007/BF00047405.
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