A compilation of large subunit (23S-like) ribosomal RNA sequences presented in a secondary structure format.
作者信息
Gutell R R, Schnare M N, Gray M W
机构信息
Cangene Corporation, Mississauga, Ontario, Canada.
出版信息
Nucleic Acids Res. 1990 Apr 25;18 Suppl(Suppl):2319-30. doi: 10.1093/nar/18.suppl.2319.
Abstract
摘要
相似文献
1
A compilation of large subunit (23S-like) ribosomal RNA sequences presented in a secondary structure format.
Nucleic Acids Res. 1990 Apr 25;18 Suppl(Suppl):2319-30. doi: 10.1093/nar/18.suppl.2319.
2
Compilation of small ribosomal subunit RNA sequences.
Nucleic Acids Res. 1990 Apr 25;18 Suppl(Suppl):2237-317. doi: 10.1093/nar/18.suppl.2237.
3
Compilation of 5S rRNA and 5S rRNA gene sequences.
Nucleic Acids Res. 1990 Apr 25;18 Suppl(Suppl):2215-30. doi: 10.1093/nar/18.suppl.2215.
4
Database on the structure of large ribosomal subunit RNA.
Nucleic Acids Res. 1994 Sep;22(17):3495-501. doi: 10.1093/nar/22.17.3495.
5
An extension of the graph theoretical approach to predict the secondary structure of large RNAs: the complex of 16S and 23S rRNAs from E. coli as a case study.
Comput Appl Biosci. 1989 Jul;5(3):211-8. doi: 10.1093/bioinformatics/5.3.211.
6
The mitochondrial ribosomal RNA molecules of Aspergillus nidulans.
Gene. 1989 Jan 30;75(1):109-18. doi: 10.1016/0378-1119(89)90387-9.
7
Nucleotide sequence of the exons of the large subunit rRNA of Neurospora crassa mitochondria.
Nucleic Acids Res. 1990 Dec 25;18(24):7440. doi: 10.1093/nar/18.24.7440.
8
Nucleotide sequence of a 23S ribosomal RNA gene from Leptospira interrogans serovar canicola strain Moulton.
Nucleic Acids Res. 1989 Mar 11;17(5):2123. doi: 10.1093/nar/17.5.2123.
9
A compilation of large subunit (23S- and 23S-like) ribosomal RNA structures.
Nucleic Acids Res. 1992 May 11;20 Suppl(Suppl):2095-109. doi: 10.1093/nar/20.suppl.2095.
10
Complete nucleotide sequence of a 23S ribosomal RNA gene from Rhodobacter capsulatus.
Nucleic Acids Res. 1988 Mar 25;16(5):2343. doi: 10.1093/nar/16.5.2343.
引用本文的文献
1
Exploring the In Vitro Thrombolytic Activity of Nattokinase From a New Strain Pseudomonas aeruginosa CMSS.
Jundishapur J Microbiol. 2015 Oct 26;8(10):e23567. doi: 10.5812/jjm.23567. eCollection 2015 Oct.
2
Organelle evolution, fragmented rRNAs, and Carl.
RNA Biol. 2014;11(3):213-6. doi: 10.4161/rna.27799. Epub 2014 Feb 6.
3
Unique features of animal mitochondrial translation systems. The non-universal genetic code, unusual features of the translational apparatus and their relevance to human mitochondrial diseases.
Proc Jpn Acad Ser B Phys Biol Sci. 2010;86(1):11-39. doi: 10.2183/pjab.86.11.
4
Characteristics of the nuclear (18S, 5.8S, 28S and 5S) and mitochondrial (12S and 16S) rRNA genes of Apis mellifera (Insecta: Hymenoptera): structure, organization, and retrotransposable elements.
Insect Mol Biol. 2006 Oct;15(5):657-86. doi: 10.1111/j.1365-2583.2006.00689.x.
5
Predicted secondary structure for 28S and 18S rRNA from Ichneumonoidea (Insecta: Hymenoptera: Apocrita): impact on sequence alignment and phylogeny estimation.
J Mol Evol. 2005 Jul;61(1):114-37. doi: 10.1007/s00239-004-0246-x. Epub 2005 Jul 14.
6
The comparative RNA web (CRW) site: an online database of comparative sequence and structure information for ribosomal, intron, and other RNAs.
BMC Bioinformatics. 2002;3:2. doi: 10.1186/1471-2105-3-2. Epub 2002 Jan 17.
7
Evaluation and refinement of tmRNA structure using gene sequences from natural microbial communities.
RNA. 2001 Sep;7(9):1310-6. doi: 10.1017/s1355838201010573.
8
Processing of a composite large subunit rRNA. Studies with chlamydomonas mutants deficient in maturation of the 23s-like rrna.
Plant Cell. 1998 Jul;10(7):1193-206. doi: 10.1105/tpc.10.7.1193.
9
Assessment of genetic diversity among strains of Pseudomonas syringae by PCR-restriction fragment length polymorphism analysis of rRNA operons with special emphasis on P. syringae pv. tomato.
Appl Environ Microbiol. 1997 Feb;63(2):498-505. doi: 10.1128/aem.63.2.498-505.1997.
10
Simplicity-correlated size growth of the nuclear 28S ribosomal RNA D3 expansion segment in the crustacean order Isopoda.
J Mol Evol. 1996 Feb;42(2):211-23. doi: 10.1007/BF02198847.
本文引用的文献
1
Multiple spacer sequences in the nuclear large subunit ribosomal RNA gene of Crithidia fasciculata.
EMBO J. 1987 Apr;6(4):1063-71. doi: 10.1002/j.1460-2075.1987.tb04859.x.
2
Precise localization and nucleotide sequence of the two mouse mitochondrial rRNA genes and three immediately adjacent novel tRNA genes.
Cell. 1980 Nov;22(1 Pt 1):157-70. doi: 10.1016/0092-8674(80)90164-6.
3
The primary and secondary structure of yeast 26S rRNA.
Nucleic Acids Res. 1981 Dec 21;9(24):6935-52. doi: 10.1093/nar/9.24.6935.
4
Sequence and gene organization of mouse mitochondrial DNA.
Cell. 1981 Oct;26(2 Pt 2):167-80. doi: 10.1016/0092-8674(81)90300-7.
5
Sequence and organization of the human mitochondrial genome.
Nature. 1981 Apr 9;290(5806):457-65. doi: 10.1038/290457a0.
6
Complete sequence of bovine mitochondrial DNA. Conserved features of the mammalian mitochondrial genome.
J Mol Biol. 1982 Apr 25;156(4):683-717. doi: 10.1016/0022-2836(82)90137-1.
7
The rRNA operon from Zea mays chloroplasts: nucleotide sequence of 23S rDNA and its homology with E.coli 23S rDNA.
Nucleic Acids Res. 1981 Jun 25;9(12):2853-69. doi: 10.1093/nar/9.12.2853.
8
The nucleotide sequence of the large ribosomal RNA gene and the adjacent tRNA genes from rat mitochondria.
Nucleic Acids Res. 1981 Aug 25;9(16):4139-48. doi: 10.1093/nar/9.16.4139.
9
Sequence analysis of the maize mitochondrial 26 S rRNA gene and flanking regions.
Plasmid. 1984 Mar;11(2):141-50. doi: 10.1016/0147-619x(84)90019-2.
10
Paramecium mitochondrial genes. II. Large subunit rRNA gene sequence and microevolution.
J Biol Chem. 1984 Apr 25;259(8):5173-81.
Zotero 插件