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利用天然丰度碳-13核磁共振波谱法对溶液中蛋白质的单个碳位点进行研究。归属策略。

Studies of individual carbon sites of proteins in solution by natural abundance carbon 13 nuclear magnetic resonance spectroscopy. Strategies for assignments.

作者信息

Oldfield E, Norton R S, Allerhand A

出版信息

J Biol Chem. 1975 Aug 25;250(16):6381-402.

PMID:169240
Abstract

Natural abundance 13C Fourier transform NMR spectra (at 15.18 MHz, in 20-mm sample tubes) of aqueous native proteins yield numerous narrow single carbon resonances of nonprotonated aromatic carbons. Techniques for the assignment of these resonances are presented. Each technique is applied to one or more of the following proteins: ferricytochrome c from horse heart and Candida krusei, ferrocytochrome c and cyanoferricytochrome c from horse heart, lysozyme from hen egg white, cyanoferrimyoglobins from horse and sperm whale skeletal muscle, and carbon monoxide myoglobin from horse. In all of the protein spectra we have examined, methine aromatic carbons give rise to broad bands. Studies of the narrow resonances of nonprotonated aromatic carbons of proteins are facilitated by removal of these broad bands by means of the convolution-difference method, preferably from spectra recorded under conditions of noise-modulated off-resonance proton decoupling. We present a summary of the chemical shift ranges for the various types of nonprotonated aromatic carbons of amino acid residues and hemes of diamagnetic proteins, based on our results for hen egg white lysozyme, horse heart ferrocytochrome c, horse carbon monoxide myoglobin, and carbon monoxide hemoglobins from various species...

摘要

天然丰度的13C傅里叶变换核磁共振谱(在15.18兆赫,于20毫米样品管中)显示,天然状态的水溶性蛋白质会产生大量非质子化芳香族碳的狭窄单碳共振峰。本文介绍了这些共振峰的归属技术。每种技术都应用于以下一种或多种蛋白质:马心脏和克鲁斯假丝酵母的高铁细胞色素c、马心脏的亚铁细胞色素c和氰化高铁细胞色素c、鸡蛋清溶菌酶、马和抹香鲸骨骼肌的氰化高铁肌红蛋白以及马的一氧化碳肌红蛋白。在我们检测的所有蛋白质谱图中,次甲基芳香族碳会产生宽峰。通过卷积差分法去除这些宽峰,最好是从在噪声调制非共振质子去耦条件下记录的谱图中去除宽峰,这有助于对蛋白质中非质子化芳香族碳的狭窄共振峰进行研究。基于我们对鸡蛋清溶菌酶、马心脏亚铁细胞色素c、马一氧化碳肌红蛋白以及来自不同物种的一氧化碳血红蛋白的研究结果,我们总结了抗磁性蛋白质氨基酸残基和血红素中各种类型非质子化芳香族碳的化学位移范围……

相似文献

1
Studies of individual carbon sites of proteins in solution by natural abundance carbon 13 nuclear magnetic resonance spectroscopy. Strategies for assignments.利用天然丰度碳-13核磁共振波谱法对溶液中蛋白质的单个碳位点进行研究。归属策略。
J Biol Chem. 1975 Aug 25;250(16):6381-402.
2
Studies of individual carbon sites of proteins in solution by natural abundance carbon 13 nuclear magnetic resonance spectroscopy. Relaxation behavior.通过天然丰度碳-13核磁共振光谱法对溶液中蛋白质的单个碳位点进行研究。弛豫行为。
J Biol Chem. 1975 Aug 25;250(16):6368-80.
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Cytochrome c: observation of numerous single-carbon sites of the reduced and oxidized species by means of natural-abundance 13C nuclear magnetic resonance spectroscopy.细胞色素c:借助自然丰度13C核磁共振光谱法对还原态和氧化态物种的众多单碳位点进行观测。
Proc Natl Acad Sci U S A. 1973 Dec;70(12):3531-5. doi: 10.1073/pnas.70.12.3531.
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Studies of individual carbon sites of hen egg white lysozyme by natural abundance carbon 13 nuclear magnetic resonance spectroscopy. Assignment of the nonprotonated aromatic carbon resonances to specific residues in the sequence.利用天然丰度碳-13核磁共振光谱对鸡蛋清溶菌酶的单个碳原子位点进行研究。将非质子化芳香碳共振峰归属到序列中的特定残基。
J Biol Chem. 1977 Mar 10;252(5):1786-94.
5
Studies of individual carbon sites of hemoglobins in solution by natural abundance carbon 13 nuclear magnetic resonance spectroscopy.利用天然丰度碳-13核磁共振光谱法对溶液中血红蛋白的单个碳位点进行研究。
J Biol Chem. 1975 Aug 25;250(16):6403-7.
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Titration behavior of individual tyrosine residues of myoglobins from sperm whale, horse, and red kangaroo.抹香鲸、马和红袋鼠肌红蛋白中单个酪氨酸残基的滴定行为。
J Biol Chem. 1976 Sep 10;251(17):5187-94.
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A systematic approach towards the complete assignment of 13C resonances for horse ferrocytochrome c.一种用于完全归属马亚铁细胞色素c的¹³C共振峰的系统方法。
Eur J Biochem. 1990 Dec 12;194(2):355-65. doi: 10.1111/j.1432-1033.1990.tb15626.x.
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Studies of chemically modified histidine residues of proteins by carbon 13 nuclear magnetic resonance spectroscopy. Reaction of hen egg white lysozyme with iodoacetate.通过碳-13核磁共振光谱对蛋白质化学修饰组氨酸残基的研究。鸡蛋清溶菌酶与碘乙酸的反应。
J Biol Chem. 1979 Apr 10;254(7):2210-3.
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Tryptophan chemical shift in peptides and proteins: a solid state carbon-13 nuclear magnetic resonance spectroscopic and quantum chemical investigation.肽和蛋白质中色氨酸的化学位移:固态碳-13核磁共振光谱和量子化学研究。
J Am Chem Soc. 2004 Apr 14;126(14):4726-34. doi: 10.1021/ja030612u.
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Participation of tryptophan 62 in the self-association of hen egg white lysozyme. Application of natural abundance carbon 13 nuclear magnetic resonance spectroscopy.色氨酸62参与鸡蛋清溶菌酶的自缔合作用。天然丰度碳-13核磁共振光谱的应用。
J Biol Chem. 1977 Mar 10;252(5):1795-8.

引用本文的文献

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Structure, dynamics, and ionization equilibria of the tyrosine residues in Bacillus circulans xylanase.枯草杆菌木聚糖酶中天冬氨酸残基的结构、动态和离解平衡。
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J Am Chem Soc. 2009 Jan 28;131(3):985-92. doi: 10.1021/ja804041p.
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Genetic assignment of resonances in the NMR spectrum of a protein: lac repressor.蛋白质核磁共振谱中共振峰的基因归属:乳糖阻遏蛋白
Proc Natl Acad Sci U S A. 1981 May;78(5):2707-11. doi: 10.1073/pnas.78.5.2707.
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Ionization of tyrosine and lysine residues in native and modified horse cytochrome c.天然和修饰的马细胞色素c中酪氨酸和赖氨酸残基的电离作用
Biochem J. 1983 Sep 1;213(3):679-86. doi: 10.1042/bj2130679.
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Structural role of the tyrosine residues of cytochrome c.细胞色素c中酪氨酸残基的结构作用。
Biochem J. 1982 Jul 1;205(1):153-65. doi: 10.1042/bj2050153.
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N.m.r. studies of myelin basic protein. Conformation of a peptide that is an antigenic determinant for B-cell reactivity.髓鞘碱性蛋白的核磁共振研究。一种作为B细胞反应性抗原决定簇的肽的构象。
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Proton magnetic resonance spectroscopic studies of proteins containing deuterated tryptophan residues.含有氘代色氨酸残基的蛋白质的质子磁共振波谱研究。
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Biophys Struct Mech. 1976 Aug 23;2(2):105-17. doi: 10.1007/BF00863704.
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Kinetics of hydrogen-deuterium exchange of tryptophan and tryptophan peptides in deutero-trifluoroacetic acid using proton magenetic resonance spectroscopy.利用质子磁共振波谱法研究色氨酸及色氨酸肽在氘代三氟乙酸中的氢-氘交换动力学
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