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绘制影响秀丽隐杆线虫生活史特征的表型可塑性及基因型-环境相互作用图谱。

Mapping phenotypic plasticity and genotype-environment interactions affecting life-history traits in Caenorhabditis elegans.

作者信息

Gutteling E W, Riksen J A G, Bakker J, Kammenga J E

机构信息

Laboratory of Nematology, Wageningen University, Wageningen, The Netherlands.

出版信息

Heredity (Edinb). 2007 Jan;98(1):28-37. doi: 10.1038/sj.hdy.6800894. Epub 2006 Sep 6.

DOI:10.1038/sj.hdy.6800894
PMID:16955112
Abstract

Phenotypic plasticity and genotype-environment interactions (GEI) play an important role in the evolution of life histories. Knowledge of the molecular genetic basis of plasticity and GEI provides insight into the underlying mechanisms of life-history changes in different environments. We used a genomewide single-nucleotide polymorphism map in a recombinant N2 x CB4856 inbred panel of the nematode Caenorhabditis elegans to study the genetic control of phenotypic plasticity to temperature in four fitness-related traits, that is, age at maturity, fertility, egg size and growth rate. We mapped quantitative trait loci (QTL) for the respective traits at 12 and 24 degrees C, as well as their plasticities. We found genetic variation and GEI for age at maturity, fertility, egg size and growth rate. GEI in fertility and egg size was attributed to changes in rank order of reaction norms. In case of age at maturity and growth rate, GEI was caused mainly by differences in the among-line variance. In total, 11 QTLs were detected, five QTL at 12 degrees C and six QTL at 24 degrees C, which were associated with life-history traits. Five QTL associated with age at maturity, fertility and growth rate showed QTL x environment interaction. These colocalized with plasticity QTL for the respective traits suggesting allelic sensitivity to temperature. Further fine mapping, complementation analyses and gene silencing are planned to identify candidate genes underlying phenotypic plasticity for age at maturity, fertility and growth.

摘要

表型可塑性和基因型 - 环境互作(GEI)在生活史的进化中起着重要作用。对可塑性和GEI的分子遗传基础的了解有助于深入了解不同环境中生活史变化的潜在机制。我们利用线虫秀丽隐杆线虫重组N2×CB4856近交系群体中的全基因组单核苷酸多态性图谱,研究了四个与适合度相关性状(即成熟年龄、繁殖力、卵大小和生长速率)对温度的表型可塑性的遗传控制。我们在12℃和24℃下绘制了各性状的数量性状基因座(QTL)及其可塑性。我们发现成熟年龄、繁殖力、卵大小和生长速率存在遗传变异和GEI。繁殖力和卵大小的GEI归因于反应规范排序的变化。在成熟年龄和生长速率方面,GEI主要由品系间方差的差异引起。总共检测到11个QTL,12℃下有5个QTL,24℃下有6个QTL,它们与生活史性状相关。与成熟年龄、繁殖力和生长速率相关的5个QTL表现出QTL×环境互作。这些与各性状的可塑性QTL共定位,表明等位基因对温度敏感。计划进一步进行精细定位、互补分析和基因沉默,以鉴定成熟年龄、繁殖力和生长的表型可塑性潜在候选基因。

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