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用基本度量法处理的疏水溶质的水合作用。

Hydration of hydrophobic solutes treated by the fundamental measure approach.

作者信息

Chuev G N, Sokolov V F

机构信息

Institute of Theoretical and Experimental Biophysics, Russian Academy of Sciences, Pushchino, Moscow Region 142290, Russia.

出版信息

J Phys Chem B. 2006 Sep 21;110(37):18496-503. doi: 10.1021/jp061491y.

DOI:10.1021/jp061491y
PMID:16970477
Abstract

We have developed a method to calculate the hydration of hydrophobic solutes by the fundamental measure theory. This method allows us to carry out calculations of the density profile and the hydration energy for hydrophobic molecules. An additional benefit of the method is the possibility to calculate interaction forces between solvated nanoparticles. Based on the designed method, we calculate hydration of spherical solutes of various sizes from one angstrom up to several nanometers. We have applied methods to evaluate the free energies, the enthalpies, and the entropies of hydrated rare gases and hydrocarbons. The obtained results are in agreement with available experimental data and simulations.

摘要

我们已经开发出一种通过基本度量理论计算疏水性溶质水合作用的方法。该方法使我们能够对疏水性分子的密度分布和水合能进行计算。该方法的另一个优点是可以计算溶剂化纳米颗粒之间的相互作用力。基于所设计的方法,我们计算了从一埃到几纳米各种尺寸球形溶质的水合作用。我们已应用相关方法来评估水合稀有气体和碳氢化合物的自由能、焓和熵。所得结果与现有的实验数据和模拟结果一致。

相似文献

1
Hydration of hydrophobic solutes treated by the fundamental measure approach.用基本度量法处理的疏水溶质的水合作用。
J Phys Chem B. 2006 Sep 21;110(37):18496-503. doi: 10.1021/jp061491y.
2
[Estimation of the hydrophobic effect based on the density functional theory].基于密度泛函理论的疏水效应估计
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Unraveling water's entropic mysteries: a unified view of nonpolar, polar, and ionic hydration.揭开水分子熵的奥秘:非极性、极性和离子水化的统一观点。
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J Phys Chem B. 2008 May 8;112(18):5661-70. doi: 10.1021/jp073485n.
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Computational assessment of the entropy of solvation of small-sized hydrophobic entities.小尺寸疏水实体溶剂化熵的计算评估。
Phys Chem Chem Phys. 2006 Dec 21;8(47):5515-21. doi: 10.1039/b611200e. Epub 2006 Nov 7.
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Pair-correlation entropy of hydrophobic hydration: decomposition into translational and orientational contributions and analysis of solute-size effects.疏水水合的对关联熵:分解为平动和取向贡献以及溶质尺寸效应分析
J Chem Phys. 2006 Jan 14;124(2):024512. doi: 10.1063/1.2137708.
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Dewetting-controlled binding of ligands to hydrophobic pockets.去湿控制配体与疏水口袋的结合。
Phys Rev Lett. 2009 Oct 30;103(18):187801. doi: 10.1103/PhysRevLett.103.187801.
2
Interfaces and hydrophobic interactions in receptor-ligand systems: A level-set variational implicit solvent approach.受体-配体体系中的界面和疏水相互作用:一种水平集变分隐式溶剂方法。
J Chem Phys. 2009 Oct 14;131(14):144102. doi: 10.1063/1.3242274.