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哺乳动物、鸟类、两栖动物和硬骨鱼原弹性蛋白的序列和结构域:弹性蛋白进化史的线索

Sequences and domain structures of mammalian, avian, amphibian and teleost tropoelastins: Clues to the evolutionary history of elastins.

作者信息

Chung Martin I S, Miao Ming, Stahl Richard J, Chan Esther, Parkinson John, Keeley Fred W

机构信息

Cardiovascular Research Program, Research Institute, Hospital for Sick Children, Toronto, ON, Canada M5G1X8.

出版信息

Matrix Biol. 2006 Oct;25(8):492-504. doi: 10.1016/j.matbio.2006.08.258. Epub 2006 Aug 12.

Abstract

Tropoelastin is the monomeric form of elastin, a polymeric extracellular matrix protein responsible for properties of extensibility and elastic recoil in connective tissues of most vertebrates. As an approach to investigate how sequence and structural characteristics of tropoelastin assist in polymeric assembly and account for the elastomeric properties of this polymer, and to better understand the evolutionary history of elastin, we have identified and characterized tropoelastins from frog (Xenopus tropicalis) and zebrafish (Danio rerio), comparing these to their mammalian and avian counterparts. Unlike other species, two tropoelastin genes were expressed in zebrafish. All tropoelastins shared a predominant and characteristic alternating domain arrangement, as well as the fundamental crosslinking sequence motifs. However, zebrafish and frog tropoelastins had several unusual characteristics, including increased exon numbers and protein molecular weights, and decreased hydropathies. For all tropoelastins there was evidence of evolutionary expansion of the proteins by extensive replication of a hydrophobic-crosslinking exon pair. This was particularly apparent for zebrafish and frog tropoelastin genes, where remnants of sequence similarity were also seen in introns flanking the replicated exon pair. While overall alignment of mammalian, avian, frog and zebrafish tropoelastin sequences was not possible because of sequence variability, the C-terminal exon was well-conserved in all species. In addition, good sequence alignment was possible for several exons just upstream of the putative region of replication, suggesting that these conserved domains may represent 'primordial' core sequences present in the ancestral sequence common to all tropoelastins and in some way essential to the structure/function of elastin.

摘要

原弹性蛋白是弹性蛋白的单体形式,弹性蛋白是一种聚合的细胞外基质蛋白,负责大多数脊椎动物结缔组织的伸展性和弹性回缩特性。作为一种研究原弹性蛋白的序列和结构特征如何协助聚合物组装并解释该聚合物弹性特性的方法,以及为了更好地理解弹性蛋白的进化历史,我们已经鉴定并表征了来自青蛙(热带爪蟾)和斑马鱼(斑马鱼)的原弹性蛋白,并将它们与哺乳动物和鸟类的同类蛋白进行比较。与其他物种不同,斑马鱼中表达了两个原弹性蛋白基因。所有原弹性蛋白都具有主要且独特的交替结构域排列,以及基本的交联序列基序。然而,斑马鱼和青蛙的原弹性蛋白有几个不寻常的特征,包括外显子数量和蛋白质分子量增加,以及亲水性降低。对于所有原弹性蛋白,都有证据表明蛋白质通过疏水交联外显子对的广泛复制而发生进化扩张。这在斑马鱼和青蛙的原弹性蛋白基因中尤为明显,在复制的外显子对两侧的内含子中也可以看到序列相似性的残余。虽然由于序列变异性,无法对哺乳动物、鸟类、青蛙和斑马鱼的原弹性蛋白序列进行整体比对,但C末端外显子在所有物种中都高度保守。此外,在假定的复制区域上游的几个外显子可以进行良好的序列比对,这表明这些保守结构域可能代表了所有原弹性蛋白共同祖先序列中存在的“原始”核心序列,并且在某种程度上对弹性蛋白的结构/功能至关重要。

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