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使用IC指纹和支持向量机分类器对功能磁共振成像独立成分进行分类

Classification of fMRI independent components using IC-fingerprints and support vector machine classifiers.

作者信息

De Martino Federico, Gentile Francesco, Esposito Fabrizio, Balsi Marco, Di Salle Francesco, Goebel Rainer, Formisano Elia

机构信息

Department of Cognitive Neurosciences, Faculty of Psychology, University of Maastricht, Maastricht, The Netherlands.

出版信息

Neuroimage. 2007 Jan 1;34(1):177-94. doi: 10.1016/j.neuroimage.2006.08.041. Epub 2006 Oct 27.

DOI:10.1016/j.neuroimage.2006.08.041
PMID:17070708
Abstract

We present a general method for the classification of independent components (ICs) extracted from functional MRI (fMRI) data sets. The method consists of two steps. In the first step, each fMRI-IC is associated with an IC-fingerprint, i.e., a representation of the component in a multidimensional space of parameters. These parameters are post hoc estimates of global properties of the ICs and are largely independent of a specific experimental design and stimulus timing. In the second step a machine learning algorithm automatically separates the IC-fingerprints into six general classes after preliminary training performed on a small subset of expert-labeled components. We illustrate this approach in a multisubject fMRI study employing visual structure-from-motion stimuli encoding faces and control random shapes. We show that: (1) IC-fingerprints are a valuable tool for the inspection, characterization and selection of fMRI-ICs and (2) automatic classifications of fMRI-ICs in new subjects present a high correspondence with those obtained by expert visual inspection of the components. Importantly, our classification procedure highlights several neurophysiologically interesting processes. The most intriguing of which is reflected, with high intra- and inter-subject reproducibility, in one IC exhibiting a transiently task-related activation in the 'face' region of the primary sensorimotor cortex. This suggests that in addition to or as part of the mirror system, somatotopic regions of the sensorimotor cortex are involved in disambiguating the perception of a moving body part. Finally, we show that the same classification algorithm can be successfully applied, without re-training, to fMRI collected using acquisition parameters, stimulation modality and timing considerably different from those used for training.

摘要

我们提出了一种对从功能磁共振成像(fMRI)数据集中提取的独立成分(ICs)进行分类的通用方法。该方法包括两个步骤。第一步,将每个fMRI-IC与一个IC指纹相关联,即该成分在多维参数空间中的一种表示。这些参数是ICs全局特性的事后估计,在很大程度上独立于特定的实验设计和刺激时间。第二步,在对一小部分由专家标记的成分进行初步训练后,一种机器学习算法会自动将IC指纹分为六个一般类别。我们在一项多受试者fMRI研究中展示了这种方法,该研究采用了编码面部和控制随机形状的视觉运动结构刺激。我们表明:(1)IC指纹是检查、表征和选择fMRI-IC的有价值工具;(2)对新受试者的fMRI-IC进行自动分类与通过专家对成分进行视觉检查获得的分类高度一致。重要的是,我们的分类程序突出了几个神经生理学上有趣的过程。其中最引人注目的是,在一个IC中,初级感觉运动皮层的“面部”区域出现了与任务相关的短暂激活,在受试者内部和受试者之间都具有很高的可重复性。这表明,除了镜像系统之外或作为其一部分,感觉运动皮层的躯体定位区域也参与了对运动身体部位感知的歧义消除。最后,我们表明,无需重新训练,相同的分类算法可以成功应用于使用与训练时显著不同的采集参数、刺激方式和时间采集的fMRI数据。

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