Suppr超能文献

生物转运过程与空间维度

Biological transport processes and space dimension.

作者信息

Nadler W, Stein D L

机构信息

Institut für Theoretische Chemie, Universität Tübingen, Federal Rebublic of Germany.

出版信息

Proc Natl Acad Sci U S A. 1991 Aug 1;88(15):6750-4. doi: 10.1073/pnas.88.15.6750.

Abstract

We discuss the generic time behavior of reaction-diffusion processes capable of modeling various types of biological transport processes, such as ligand migration in proteins and gating fluctuations in ion channel proteins. The main observable in these two cases, the fraction of unbound ligands and the probability of finding the channel in the closed state, respectively, exhibits an algebraic t-1/2 decay at intermediate times, followed by an exponential cutoff. We provide a simple framework for understanding these observations and explain their ubiquity by showing that these qualitative results are independent of space dimension. We also derive an experimental criterion to distinguish between a one-dimensional process and one whose effective dimension is higher.

摘要

我们讨论了反应扩散过程的一般时间行为,该过程能够对各种类型的生物传输过程进行建模,例如蛋白质中配体的迁移以及离子通道蛋白中的门控波动。在这两种情况下,主要的可观测值,即未结合配体的比例和通道处于关闭状态的概率,在中间时间分别呈现出代数t^(-1/2)衰减,随后是指数截断。我们提供了一个简单的框架来理解这些观测结果,并通过表明这些定性结果与空间维度无关来解释它们的普遍性。我们还推导了一个实验标准,以区分一维过程和有效维度更高的过程。

相似文献

1
Biological transport processes and space dimension.生物转运过程与空间维度
Proc Natl Acad Sci U S A. 1991 Aug 1;88(15):6750-4. doi: 10.1073/pnas.88.15.6750.
4
Analysis of post-perturbation gating kinetics of single ion channels.
Proc R Soc Lond B Biol Sci. 1989 Feb 22;236(1282):29-52. doi: 10.1098/rspb.1989.0011.
7
Reptation theory of ion channel gating.离子通道门控的爬行理论。
Biophys J. 1990 Apr;57(4):857-64. doi: 10.1016/S0006-3495(90)82605-9.
8
Equivalence of aggregated Markov models of ion-channel gating.离子通道门控聚集马尔可夫模型的等效性
Proc R Soc Lond B Biol Sci. 1989 Apr 22;236(1284):269-309. doi: 10.1098/rspb.1989.0024.

引用本文的文献

4
Ion channel gating: a first-passage time analysis of the Kramers type.离子通道门控:克莱默斯型首次通过时间分析
Proc Natl Acad Sci U S A. 2002 Mar 19;99(6):3552-6. doi: 10.1073/pnas.052015699. Epub 2002 Mar 12.

本文引用的文献

1
Defect diffusion and closed-time distributions for ionic channels in cell membranes.
Phys Rev A Gen Phys. 1989 Feb 15;39(4):2112-2125. doi: 10.1103/physreva.39.2112.
2
Solvent viscosity and protein dynamics.溶剂粘度与蛋白质动力学。
Biochemistry. 1980 Nov 11;19(23):5147-57. doi: 10.1021/bi00564a001.
4
The internal dynamics of globular proteins.球状蛋白质的内部动力学。
CRC Crit Rev Biochem. 1981;9(4):293-349. doi: 10.3109/10409238109105437.
5
Protein states and proteinquakes.蛋白质状态与蛋白质震颤。
Proc Natl Acad Sci U S A. 1985 Aug;82(15):5000-4. doi: 10.1073/pnas.82.15.5000.
7
Rebinding and relaxation in the myoglobin pocket.肌红蛋白口袋中的再结合与松弛
Biophys Chem. 1987 May 9;26(2-3):337-55. doi: 10.1016/0301-4622(87)80034-0.

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验