• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

Tup1共抑制因子指导Htz1在特定启动子核小体上沉积,该核小体标记GAL1基因以便快速激活。

The Tup1 corepressor directs Htz1 deposition at a specific promoter nucleosome marking the GAL1 gene for rapid activation.

作者信息

Gligoris Thomas, Thireos George, Tzamarias Dimitris

机构信息

Institute of Molecular Biology and Biotechnology, Foundation of Research and Technology, University of Crete, P.O. Box 1527, Vassilika Vouton, 711 10 Heraklion, Crete, Greece.

出版信息

Mol Cell Biol. 2007 Jun;27(11):4198-205. doi: 10.1128/MCB.00238-07. Epub 2007 Mar 26.

DOI:10.1128/MCB.00238-07
PMID:17387147
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1900012/
Abstract

The SWR1 complex (SWR1-C)-dependent deposition of the histone variant Htz1 on promoter nucleosomes is typical of Saccharomyces cerevisiae genes whose expression is frequently reprogrammed. Although this epigenetic marking is of significant physiological importance, the determinants of Htz1 deposition, the conditions that set off SWR1-C occupancy, and the implications of Htz1 in transcriptional initiation are issues that remain unresolved. In this report, we addressed these questions by investigating the GAL1 promoter. We show that Htz1 is required for efficient Mediator recruitment and transcription only when the GAL1 promoter is under the influence of the Tup1 corepressor. In fact, we show that it is Tup1 that specifies Htz1 deposition for the promoter nucleosome covering the transcription start site. This deposition occurs rapidly following transcriptional repression, and it correlates with a Tup1-independent transient recruitment of the SWR1 complex. We propose that Tup1 cooperates with SWR1-C and specifies Htz1 deposition at GAL1, thereby marking the promoter for rapid neutralization from its repressive effects.

摘要

组蛋白变体Htz1在启动子核小体上的沉积依赖于酿酒酵母中经常重新编程表达的基因的SWR1复合物(SWR1-C)。尽管这种表观遗传标记具有重要的生理意义,但Htz1沉积的决定因素、引发SWR1-C占据的条件以及Htz1在转录起始中的作用仍未解决。在本报告中,我们通过研究GAL1启动子来解决这些问题。我们表明,只有当GAL1启动子受到Tup1共抑制因子的影响时,Htz1才是有效募集中介体和转录所必需的。事实上,我们表明是Tup1指定了覆盖转录起始位点的启动子核小体的Htz1沉积。这种沉积在转录抑制后迅速发生,并且与SWR1复合物的Tup1独立的瞬时募集相关。我们提出Tup1与SWR1-C协同作用,并指定GAL1处的Htz1沉积,从而标记启动子以便迅速消除其抑制作用。

相似文献

1
The Tup1 corepressor directs Htz1 deposition at a specific promoter nucleosome marking the GAL1 gene for rapid activation.Tup1共抑制因子指导Htz1在特定启动子核小体上沉积,该核小体标记GAL1基因以便快速激活。
Mol Cell Biol. 2007 Jun;27(11):4198-205. doi: 10.1128/MCB.00238-07. Epub 2007 Mar 26.
2
Preferential occupancy of histone variant H2AZ at inactive promoters influences local histone modifications and chromatin remodeling.组蛋白变体H2AZ在无活性启动子上的优先占据会影响局部组蛋白修饰和染色质重塑。
Proc Natl Acad Sci U S A. 2005 Dec 20;102(51):18385-90. doi: 10.1073/pnas.0507975102. Epub 2005 Dec 12.
3
Variant histone H2A.Z, but not the HMG proteins Nhp6a/b, is essential for the recruitment of Swi/Snf, Mediator, and SAGA to the yeast GAL1 UAS(G).变异组蛋白H2A.Z,而非高迁移率族蛋白Nhp6a/b,对于Swi/Snf、中介体和SAGA募集至酵母GAL1上游激活序列(UAS(G))至关重要。
Biochem Biophys Res Commun. 2008 May 16;369(4):1103-7. doi: 10.1016/j.bbrc.2008.02.144. Epub 2008 Mar 10.
4
Epigenetic Transcriptional Memory of Genes Depends on Growth in Glucose and the Tup1 Transcription Factor in .基因的表观遗传转录记忆取决于葡萄糖中的生长以及酿酒酵母中的Tup1转录因子。 (注:原文中“in.”后面似乎缺少具体内容,这里根据常见情况补充了“酿酒酵母”,可根据实际完整原文进行调整)
Genetics. 2017 Aug;206(4):1895-1907. doi: 10.1534/genetics.117.201632. Epub 2017 Jun 12.
5
Helix 12 in the human estrogen receptor (hER) is essential for the hER function by overcoming nucleosome repression in yeast.人类雌激素受体(hER)中的螺旋12通过克服酵母中的核小体抑制作用对hER功能至关重要。
J Cell Biochem. 2002;86(2):224-38. doi: 10.1002/jcb.10229.
6
The Set2 methyltransferase associates with Ssn6 yet Tup1-Ssn6 repression is independent of histone methylation.Set2甲基转移酶与Ssn6相关联,但Tup1 - Ssn6介导的基因抑制独立于组蛋白甲基化。
Biochem Biophys Res Commun. 2006 Jan 20;339(3):905-14. doi: 10.1016/j.bbrc.2005.11.103. Epub 2005 Nov 28.
7
Transcriptional repression by Tup1-Ssn6.由Tup1-Ssn6介导的转录抑制
Biochem Cell Biol. 2006 Aug;84(4):437-43. doi: 10.1139/o06-073.
8
Redundant mechanisms are used by Ssn6-Tup1 in repressing chromosomal gene transcription in Saccharomyces cerevisiae.在酿酒酵母中,Ssn6-Tup1利用多种冗余机制来抑制染色体基因转录。
J Biol Chem. 2004 Sep 17;279(38):39240-50. doi: 10.1074/jbc.M407159200. Epub 2004 Jul 14.
9
The histone variant H2A.Z interconverts two stable epigenetic chromatin states.组蛋白变体 H2A.Z 转换两种稳定的表观遗传染色质状态。
Biochem J. 2011 Nov 1;439(3):487-95. doi: 10.1042/BJ20110791.
10
The nuclear pore regulates GAL1 gene transcription by controlling the localization of the SUMO protease Ulp1.核孔通过控制 SUMO 蛋白酶 Ulp1 的定位来调节 GAL1 基因转录。
Mol Cell. 2013 Sep 26;51(6):807-18. doi: 10.1016/j.molcel.2013.08.047.

引用本文的文献

1
Genetic analysis argues for a coactivator function for the Saccharomyces cerevisiae Tup1 corepressor.遗传分析表明,酿酒酵母 Tup1 核心抑制因子具有共激活子功能。
Genetics. 2021 Oct 2;219(2). doi: 10.1093/genetics/iyab120.
2
Variation, Variegation and Heritable Gene Repression in .……中的变异、杂色和可遗传的基因抑制
Front Genet. 2021 Mar 4;12:630506. doi: 10.3389/fgene.2021.630506. eCollection 2021.
3
Metabolic transcriptional memory.代谢转录记忆。
Mol Metab. 2020 Aug;38:100955. doi: 10.1016/j.molmet.2020.01.019. Epub 2020 Feb 12.
4
Epigenetic Transcriptional Memory of Genes Depends on Growth in Glucose and the Tup1 Transcription Factor in .基因的表观遗传转录记忆取决于葡萄糖中的生长以及酿酒酵母中的Tup1转录因子。 (注:原文中“in.”后面似乎缺少具体内容,这里根据常见情况补充了“酿酒酵母”,可根据实际完整原文进行调整)
Genetics. 2017 Aug;206(4):1895-1907. doi: 10.1534/genetics.117.201632. Epub 2017 Jun 12.
5
Choose Your Own Adventure: The Role of Histone Modifications in Yeast Cell Fate.选择你自己的冒险:组蛋白修饰在酵母细胞命运中的作用。
J Mol Biol. 2017 Jun 30;429(13):1946-1957. doi: 10.1016/j.jmb.2016.10.018. Epub 2016 Oct 18.
6
Sumoylation controls the timing of Tup1-mediated transcriptional deactivation.SUMO 化修饰控制 Tup1 介导的转录失活的时间。
Nat Commun. 2015 Mar 13;6:6610. doi: 10.1038/ncomms7610.
7
Distinct roles for histone chaperones in the deposition of Htz1 in chromatin.组蛋白伴侣在Htz1于染色质中沉积过程中的不同作用。
Biosci Rep. 2014 Sep 19;34(5):e00139. doi: 10.1042/BSR20140092.
8
Sumoylation and transcription regulation at nuclear pores.核孔处的类泛素化修饰与转录调控
Chromosoma. 2015 Mar;124(1):45-56. doi: 10.1007/s00412-014-0481-x. Epub 2014 Aug 30.
9
The yeast Cyc8-Tup1 complex cooperates with Hda1p and Rpd3p histone deacetylases to robustly repress transcription of the subtelomeric FLO1 gene.酵母Cyc8-Tup1复合物与Hda1p和Rpd3p组蛋白去乙酰化酶协同作用,以强烈抑制亚端粒FLO1基因的转录。
Biochim Biophys Acta. 2014 Nov;1839(11):1242-55. doi: 10.1016/j.bbagrm.2014.07.022. Epub 2014 Aug 7.
10
Threonine-4 of the budding yeast RNAP II CTD couples transcription with Htz1-mediated chromatin remodeling.苏氨酸-4 的芽殖酵母 RNAP II CTD 耦合转录与 Htz1 介导的染色质重塑。
Proc Natl Acad Sci U S A. 2014 Aug 19;111(33):11924-31. doi: 10.1073/pnas.1412802111. Epub 2014 Jul 28.

本文引用的文献

1
Acetylation of H2AZ Lys 14 is associated with genome-wide gene activity in yeast.酵母中H2AZ赖氨酸14的乙酰化与全基因组基因活性相关。
Genes Dev. 2006 Mar 15;20(6):711-22. doi: 10.1101/gad.1395506.
2
The Saccharomyces cerevisiae histone H2A variant Htz1 is acetylated by NuA4.酿酒酵母组蛋白H2A变体Htz1被NuA4乙酰化。
Genes Dev. 2006 Mar 15;20(6):660-5. doi: 10.1101/gad.1388106.
3
Activator-specific recruitment of Mediator in vivo.体内中介体的激活剂特异性募集。
Nat Struct Mol Biol. 2006 Feb;13(2):117-20. doi: 10.1038/nsmb1049. Epub 2006 Jan 22.
4
Control of transcription through intragenic patterns of nucleosome composition.通过核小体组成的基因内模式控制转录。
Cell. 2005 Dec 29;123(7):1187-90. doi: 10.1016/j.cell.2005.12.010.
5
Preferential occupancy of histone variant H2AZ at inactive promoters influences local histone modifications and chromatin remodeling.组蛋白变体H2AZ在无活性启动子上的优先占据会影响局部组蛋白修饰和染色质重塑。
Proc Natl Acad Sci U S A. 2005 Dec 20;102(51):18385-90. doi: 10.1073/pnas.0507975102. Epub 2005 Dec 12.
6
Variant histone H2A.Z is globally localized to the promoters of inactive yeast genes and regulates nucleosome positioning.变体组蛋白H2A.Z在全基因组范围内定位于无活性酵母基因的启动子区域,并调控核小体定位。
PLoS Biol. 2005 Dec;3(12):e384. doi: 10.1371/journal.pbio.0030384. Epub 2005 Nov 1.
7
Histone variant H2A.Z marks the 5' ends of both active and inactive genes in euchromatin.组蛋白变体H2A.Z标记常染色质中活跃基因和非活跃基因的5'端。
Cell. 2005 Oct 21;123(2):233-48. doi: 10.1016/j.cell.2005.10.002.
8
Genome-wide dynamics of Htz1, a histone H2A variant that poises repressed/basal promoters for activation through histone loss.Htz1的全基因组动态变化,Htz1是一种组蛋白H2A变体,通过组蛋白缺失使抑制/基础启动子为激活做好准备。
Cell. 2005 Oct 21;123(2):219-31. doi: 10.1016/j.cell.2005.08.036.
9
Intrinsic histone-DNA interactions and low nucleosome density are important for preferential accessibility of promoter regions in yeast.内在的组蛋白与DNA相互作用以及低核小体密度对于酵母中启动子区域的优先可及性很重要。
Mol Cell. 2005 Jun 10;18(6):735-48. doi: 10.1016/j.molcel.2005.05.003.
10
Evidence for eviction and rapid deposition of histones upon transcriptional elongation by RNA polymerase II.RNA聚合酶II转录延伸时组蛋白被逐出并快速沉积的证据。
Mol Cell Biol. 2004 Dec;24(23):10111-7. doi: 10.1128/MCB.24.23.10111-10117.2004.