Haynes Jennifer, Garcia Bianca, Stollar Elliott J, Rath Arianna, Andrews Brenda J, Davidson Alan R
Department of Moledular and Medical Genetics, University of Toronto, Toronto, Ontario, Canada.
Genetics. 2007 May;176(1):193-208. doi: 10.1534/genetics.106.070300. Epub 2007 Apr 3.
Many protein-protein interaction domains bind to multiple targets. However, little is known about how the interactions of a single domain with many proteins are controlled and modulated under varying cellular conditions. In this study, we investigated the in vivo effects of Abp1p SH3 domain mutants that incrementally reduce target-binding affinity in four different yeast mutant backgrounds in which Abp1p activity is essential for growth. Although the severity of the phenotypic defects observed generally increased as binding affinity was reduced, some genetic backgrounds (prk1 Delta and sla1 Delta) tolerated large affinity reductions while others (sac6 Delta and sla2 Delta) were much more sensitive to these reductions. To elucidate the mechanisms behind these observations, we determined that Ark1p is the most important Abp1p SH3 domain interactor in prk1 Delta cells, but that interactions with multiple targets, including Ark1p and Scp1p, are required in the sac6 Delta background. We establish that the Abp1p SH3 domain makes different, functionally important interactions under different genetic conditions, and these changes in function are reflected by changes in the binding affinity requirement of the domain. These data provide the first evidence of biological relevance for any Abp1p SH3 domain-mediated interaction. We also find that considerable reductions in binding affinity are tolerated by the cell with little effect on growth rate, even when the actin cytoskeletal morphology is significantly perturbed.
许多蛋白质-蛋白质相互作用结构域可与多个靶标结合。然而,对于单个结构域与多种蛋白质之间的相互作用在不同细胞条件下是如何受到控制和调节的,我们却知之甚少。在本研究中,我们调查了Abp1p SH3结构域突变体在四种不同酵母突变背景下的体内效应,这些突变体逐步降低了靶标结合亲和力,而在这些酵母突变背景中Abp1p活性对生长至关重要。尽管观察到的表型缺陷的严重程度通常随着结合亲和力的降低而增加,但一些遗传背景(prk1Δ和sla1Δ)能够耐受较大的亲和力降低,而其他背景(sac6Δ和sla2Δ)对这些降低则更为敏感。为了阐明这些观察结果背后的机制,我们确定Ark1p是prk1Δ细胞中最重要的Abp1p SH3结构域相互作用蛋白,但在sac6Δ背景中则需要与包括Ark1p和Scp1p在内的多个靶标相互作用。我们证实,Abp1p SH3结构域在不同的遗传条件下会产生不同的、具有功能重要性的相互作用,并且这些功能变化反映在该结构域结合亲和力需求的变化上。这些数据首次证明了任何Abp1p SH3结构域介导的相互作用具有生物学相关性。我们还发现,即使肌动蛋白细胞骨架形态受到显著扰动,细胞也能耐受结合亲和力的大幅降低,而对生长速率几乎没有影响。