Kotnova Alina P, Glukhov Ivan A, Karpova Nina N, Salenko Veniamin B, Lyubomirskaya Natalia V, Ilyin Yuriy V
Engelhardt Institute of Molecular Biology, Russian Academy of Sciences, Moscow, Russia.
Gene. 2007 Jul 1;396(1):39-45. doi: 10.1016/j.gene.2007.02.019. Epub 2007 Mar 14.
Long terminal repeat (LTR) retrotransposon gtwin was initially discovered in silico, and then it was isolated as gypsy-homologous sequence from Drosophila melanogaster strain, G32. The presence of ORF3 suggests, that gtwin, like gypsy, may be an endogenous retrovirus, which can leave the cell and infect another one. Therefore, in this study we decided to investigate the distribution of gtwin in different species of the melanogaster subgroup in order to find out whether gtwin can be transferred horizontally as well as vertically. Gtwin was found in all 9 species of this subgroup, hence it seems to have inhabited the host genomes for a long time. In addition, we have shown that in the Drosophila erecta genome two gtwin families are present. The first one has 93% of identity to D. melanogaster element and is likely to be a descendant of gtwin that existed in Drosophila before the divergence of the melanogaster subgroup species. The other one has >99% of identity to D. melanogaster gtwin. The most reasonable explanation is that this element has been recently horizontally transferred between D. melanogaster and D. erecta. The number and variety of gtwin copies from the "infectious" family suggest that after the horizontal transfer into D. erecta genome, gtwin underwent amplification and aberrations, leading to the rise of its diverse variants.
长末端重复序列(LTR)反转录转座子gtwin最初是在计算机上发现的,随后从黑腹果蝇品系G32中作为与gypsy同源的序列分离出来。ORF3的存在表明,gtwin可能像gypsy一样是一种内源性逆转录病毒,它可以离开细胞并感染另一个细胞。因此,在本研究中,我们决定调查gtwin在黑腹果蝇亚组不同物种中的分布情况,以确定gtwin是否既能垂直传递也能水平转移。在该亚组的所有9个物种中都发现了gtwin,因此它似乎已经在宿主基因组中存在了很长时间。此外,我们还表明,在直立果蝇基因组中存在两个gtwin家族。第一个家族与黑腹果蝇元件有93%的同一性,可能是黑腹果蝇亚组物种分化之前就存在于果蝇中的gtwin的后代。另一个家族与黑腹果蝇gtwin有>99%的同一性。最合理的解释是,这个元件最近在黑腹果蝇和直立果蝇之间进行了水平转移。来自“感染性”家族的gtwin拷贝的数量和多样性表明,在水平转移到直立果蝇基因组后,gtwin经历了扩增和畸变,导致其产生了多种变体。