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专性降解石油的海洋细菌。

Obligate oil-degrading marine bacteria.

作者信息

Yakimov Michail M, Timmis Kenneth N, Golyshin Peter N

机构信息

Istituto per l'Ambiente Marino Costiero, CNR, Messina 98122, Italy.

出版信息

Curr Opin Biotechnol. 2007 Jun;18(3):257-66. doi: 10.1016/j.copbio.2007.04.006. Epub 2007 May 9.

Abstract

Over the past few years, a new and ecophysiologically unusual group of marine hydrocarbon-degrading bacteria - the obligate hydrocarbonoclastic bacteria (OHCB) - has been recognized and shown to play a significant role in the biological removal of petroleum hydrocarbons from polluted marine waters. The introduction of oil or oil constituents into seawater leads to successive blooms of a relatively limited number of indigenous marine bacterial genera--Alcanivorax, Marinobacter, Thallassolituus, Cycloclasticus, Oleispira and a few others (the OHCB)--which are present at low or undetectable levels before the polluting event. The types of OHCB that bloom depend on the latitude/temperature, salinity, redox and other prevailing physical-chemical factors. These blooms result in the rapid degradation of many oil constituents, a process that can be accelerated further by supplementation with limiting nutrients. Genome sequencing and functional genomic analysis of Alcanivorax borkumensis, the paradigm of OHCB, has provided significant insights into the genomic basis of the efficiency and versatility of its hydrocarbon utilization, the metabolic routes underlying its special hydrocarbon diet, and its ecological success. These and other studies have revealed the potential of OHCB for multiple biotechnological applications that include not only oil pollution mitigation, but also biopolymer production and biocatalysis.

摘要

在过去几年中,一类新的、生态生理学上不同寻常的海洋烃降解细菌——专性嗜烃菌(OHCB)——已被识别出来,并被证明在从受污染海水中生物去除石油烃方面发挥着重要作用。向海水中引入石油或石油成分会导致相对有限数量的本地海洋细菌属——食烷菌属、海杆菌属、海油分解菌属、环裂菌属、油螺旋菌属以及其他一些菌属(OHCB)——相继大量繁殖,这些菌属在污染事件发生前处于低水平或检测不到的状态。大量繁殖的OHCB类型取决于纬度/温度、盐度、氧化还原状态和其他主要的物理化学因素。这些大量繁殖导致许多石油成分迅速降解,通过补充限制性营养物质,这一过程可以进一步加速。OHCB的典范——伯氏食烷菌的基因组测序和功能基因组分析,为其烃类利用效率和多功能性的基因组基础、其特殊烃类饮食背后的代谢途径以及其生态成功提供了重要见解。这些研究和其他研究揭示了OHCB在多种生物技术应用中的潜力,这些应用不仅包括减轻石油污染,还包括生物聚合物生产和生物催化。

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