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用于包装双链DNA和双链RNA的病毒纳米马达。

Viral nanomotors for packaging of dsDNA and dsRNA.

作者信息

Guo Peixuan, Lee Tae Jin

机构信息

Department of Comparative Pathobiology and Weldon School of Biomedical Engineering, Purdue University, West Lafayette, IN 47907, USA.

出版信息

Mol Microbiol. 2007 May;64(4):886-903. doi: 10.1111/j.1365-2958.2007.05706.x.

DOI:10.1111/j.1365-2958.2007.05706.x
PMID:17501915
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2366019/
Abstract

While capsid proteins are assembled around single-stranded genomic DNA or RNA in rod-shaped viruses, the lengthy double-stranded genome of other viruses is packaged forcefully within a preformed protein shell. This entropically unfavourable DNA or RNA packaging is accomplished by an ATP-driven viral nanomotor, which is mainly composed of two components, the oligomerized channel and the packaging enzymes. This intriguing DNA or RNA packaging process has provoked interest among virologists, bacteriologists, biochemists, biophysicists, chemists, structural biologists and computational scientists alike, especially those interested in nanotechnology, nanomedicine, AAA+ family proteins, energy conversion, cell membrane transport, DNA or RNA replication and antiviral therapy. This review mainly focuses on the motors of double-stranded DNA viruses, but double-stranded RNA viral motors are also discussed due to interesting similarities. The novel and ingenious configuration of these nanomotors has inspired the development of biomimetics for nanodevices. Advances in structural and functional studies have increased our understanding of the molecular basis of biological movement to the point where we can begin thinking about possible applications of the viral DNA packaging motor in nanotechnology and medical applications.

摘要

在杆状病毒中,衣壳蛋白围绕单链基因组DNA或RNA组装,而其他病毒的长双链基因组则被强行包装在预先形成的蛋白质外壳内。这种熵不利的DNA或RNA包装是由ATP驱动的病毒纳米马达完成的,该纳米马达主要由两个组件组成,即寡聚化通道和包装酶。这种引人入胜的DNA或RNA包装过程引起了病毒学家、细菌学家、生物化学家、生物物理学家、化学家、结构生物学家和计算科学家的兴趣,特别是那些对纳米技术、纳米医学、AAA+家族蛋白、能量转换、细胞膜运输、DNA或RNA复制以及抗病毒治疗感兴趣的人。本综述主要关注双链DNA病毒的马达,但由于有趣的相似性,也讨论了双链RNA病毒马达。这些纳米马达新颖巧妙的结构激发了纳米器件仿生学的发展。结构和功能研究的进展使我们对生物运动的分子基础有了更多了解,以至于我们可以开始思考病毒DNA包装马达在纳米技术和医学应用中的可能应用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d6f2/2366019/b2eae1e7ba77/mmi0064-0886-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d6f2/2366019/3d1b559d4cb7/mmi0064-0886-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d6f2/2366019/b2eae1e7ba77/mmi0064-0886-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d6f2/2366019/3d1b559d4cb7/mmi0064-0886-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d6f2/2366019/b2eae1e7ba77/mmi0064-0886-f2.jpg

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2
Counting of six pRNAs of phi29 DNA-packaging motor with customized single-molecule dual-view system.使用定制的单分子双视图系统对 phi29 DNA 包装马达的六种原核 RNA 进行计数。
EMBO J. 2007 Jan 24;26(2):527-37. doi: 10.1038/sj.emboj.7601506.
3
Assembly of bacteriophage lambda terminase into a viral DNA maturation and packaging machine.
RNA nanotechnology to build a dodecahedral genome of single-stranded RNA virus.
利用 RNA 纳米技术构建单链 RNA 病毒的十二面体基因组。
RNA Biol. 2021 Dec;18(12):2390-2400. doi: 10.1080/15476286.2021.1915620. Epub 2021 Apr 29.
4
Controlling the Revolving and Rotating Motion Direction of Asymmetric Hexameric Nanomotor by Arginine Finger and Channel Chirality.通过精氨酸手指和通道手性控制不对称六聚体纳米马达的旋转和转动运动方向。
ACS Nano. 2019 Jun 25;13(6):6207-6223. doi: 10.1021/acsnano.8b08849. Epub 2019 May 28.
5
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Transgenic Res. 2019 Feb;28(1):151-164. doi: 10.1007/s11248-018-0109-7. Epub 2019 Jan 3.
6
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J Virol. 2018 Apr 13;92(9). doi: 10.1128/JVI.01989-17. Print 2018 May 1.
7
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8
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9
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Annu Rev Virol. 2015 Nov;2(1):379-401. doi: 10.1146/annurev-virology-100114-055141. Epub 2015 Sep 25.
10
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Microbiol Mol Biol Rev. 2016 Jan 27;80(1):161-86. doi: 10.1128/MMBR.00056-15. Print 2016 Mar.
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Biochemistry. 2006 Dec 26;45(51):15259-68. doi: 10.1021/bi0615036. Epub 2006 Nov 30.
4
Controlling bacteriophage phi29 DNA-packaging motor by addition or discharge of a peptide at N-terminus of connector protein that interacts with pRNA.通过在与pRNA相互作用的连接蛋白的N端添加或释放一种肽来控制噬菌体phi29 DNA包装马达。
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5
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7
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8
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10
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