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空间位阻对表面反应的影响:在BIAcore中的应用

Steric hindrance effects on surface reactions: applications to BIAcore.

作者信息

Edwards David A

机构信息

Department of Mathematical Sciences, University of Delaware, Newark, DE 19716-2553, USA.

出版信息

J Math Biol. 2007 Oct;55(4):517-39. doi: 10.1007/s00285-007-0093-7. Epub 2007 May 25.

Abstract

Because surface-volume reactions occur in many biological and industrial processes, understanding the rate of such reactions is important. The BIAcore surface plasmon resonance (SPR) biosensor for measuring rate constants has such a geometry. Though several models of the BIAcore have been presented, few take into account that large ligand molecules can block multiple receptor sites, thus skewing the sensogram data. In this paper some general mathematical principles are stated for handling this phenomenon, and a surface-reaction model is presented explicitly. An integro-partial differential equation results, which can be simplified greatly using perturbation techniques, yielding linear and nonlinear integrodifferential equations. Explicit and asymptotic solutions are constructed for cases motivated by experimental design. The general analysis can provide insight into surface-volume reactions occurring in various contexts. In particular, the steric hindrance effect can be quantified with a single dimensionless parameter.

摘要

由于表面-体积反应发生在许多生物和工业过程中,了解此类反应的速率很重要。用于测量速率常数的BIAcore表面等离子体共振(SPR)生物传感器就具有这样的几何结构。尽管已经提出了几种BIAcore模型,但很少有人考虑到大的配体分子会阻断多个受体位点,从而使传感图数据产生偏差。本文阐述了处理这一现象的一些一般数学原理,并明确提出了一个表面反应模型。由此得到一个积分-偏微分方程,利用微扰技术可以将其大大简化,得到线性和非线性积分微分方程。针对由实验设计引发的情况构建了显式解和渐近解。一般分析可以深入了解在各种情况下发生的表面-体积反应。特别是,空间位阻效应可以用一个单一的无量纲参数来量化。

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