• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

用于突变检测的来自芹菜的重组核酸酶CEL I和来自菠菜的SP I 。

Recombinant nucleases CEL I from celery and SP I from spinach for mutation detection.

作者信息

Pimkin Maxim, Caretti Elena, Canutescu Adrian, Yeung Jeffrey B, Cohn Heather, Chen Yibai, Oleykowski Catherine, Bellacosa Alfonso, Yeung Anthony T

机构信息

Basic Science, Fox Chase Cancer Center, Philadelphia, PA, USA.

出版信息

BMC Biotechnol. 2007 Jun 1;7:29. doi: 10.1186/1472-6750-7-29.

DOI:10.1186/1472-6750-7-29
PMID:17543120
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1896157/
Abstract

BACKGROUND

The detection of unknown mutations is important in research and medicine. For this purpose, a mismatch-specific endonuclease CEL I from celery has been established as a useful tool in high throughput projects. Previously, CEL I-like activities were described only in a variety of plants and could not be expressed in an active form in bacteria.

RESULTS

We describe expression of active recombinant plant mismatch endonucleases and modification of their activities. We also report the cloning of a CEL I ortholog from Spinacia oleracea (spinach) which we termed SP I nuclease. Active CEL I and SP I nucleases were expressed as C-terminal hexahistidine fusions and affinity purified from the cell culture media. Both recombinant enzymes were active in mutation detection in BRCA1 gene of patient-derived DNA. Native SP nuclease purified from spinach is unable to incise at single-nucleotide substitutions and loops containing a guanine nucleotide, but the recombinant SP I nuclease can cut at these sites.

CONCLUSION

The insect cell-expressed CEL I orthologs may not be identical to their native counterparts purified from plant tissues. The present expression system should facilitate further development of CEL I-based mutation detection technologies.

摘要

背景

未知突变的检测在研究和医学中至关重要。为此,来自芹菜的错配特异性核酸内切酶CEL I已成为高通量项目中的一种有用工具。此前,类似CEL I的活性仅在多种植物中被描述,且无法在细菌中以活性形式表达。

结果

我们描述了活性重组植物错配核酸内切酶的表达及其活性的修饰。我们还报告了从菠菜(Spinacia oleracea)中克隆出的一种CEL I直系同源物,我们将其命名为SP I核酸酶。活性CEL I和SP I核酸酶以C端六组氨酸融合蛋白的形式表达,并从细胞培养基中进行亲和纯化。这两种重组酶在检测患者来源DNA的BRCA1基因中的突变时均具有活性。从菠菜中纯化的天然SP核酸酶无法在单核苷酸取代处以及含有鸟嘌呤核苷酸的环处切割,但重组SP I核酸酶可以在这些位点切割。

结论

昆虫细胞表达的CEL I直系同源物可能与从植物组织中纯化的天然对应物不同。目前的表达系统应有助于基于CEL I的突变检测技术的进一步发展。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f0f8/1896157/e3f18024d09d/1472-6750-7-29-4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f0f8/1896157/41bd19565c08/1472-6750-7-29-1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f0f8/1896157/e9ef3744ff9a/1472-6750-7-29-2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f0f8/1896157/dece99541838/1472-6750-7-29-3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f0f8/1896157/e3f18024d09d/1472-6750-7-29-4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f0f8/1896157/41bd19565c08/1472-6750-7-29-1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f0f8/1896157/e9ef3744ff9a/1472-6750-7-29-2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f0f8/1896157/dece99541838/1472-6750-7-29-3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f0f8/1896157/e3f18024d09d/1472-6750-7-29-4.jpg

相似文献

1
Recombinant nucleases CEL I from celery and SP I from spinach for mutation detection.用于突变检测的来自芹菜的重组核酸酶CEL I和来自菠菜的SP I 。
BMC Biotechnol. 2007 Jun 1;7:29. doi: 10.1186/1472-6750-7-29.
2
Incision at nucleotide insertions/deletions and base pair mismatches by the SP nuclease of spinach.菠菜SP核酸酶对核苷酸插入/缺失和碱基对错配处的切割
Biochemistry. 1999 Feb 16;38(7):2200-5. doi: 10.1021/bi982318y.
3
Production and characterization of the celery mismatch endonuclease CEL II using baculovirus/silkworm expression system.利用杆状病毒/家蚕表达系统生产和鉴定野芹菜错配内切酶 CEL II。
Appl Microbiol Biotechnol. 2013 Aug;97(15):6813-22. doi: 10.1007/s00253-012-4583-1. Epub 2012 Nov 25.
4
Mutation detection using a novel plant endonuclease.使用新型植物核酸内切酶进行突变检测。
Nucleic Acids Res. 1998 Oct 15;26(20):4597-602. doi: 10.1093/nar/26.20.4597.
5
Purification, cloning, and characterization of the CEL I nuclease.CEL I核酸酶的纯化、克隆及特性分析
Biochemistry. 2000 Apr 4;39(13):3533-41. doi: 10.1021/bi992376z.
6
Nuclease SP: a novel enzyme from spinach that incises damaged duplex DNA preferentially at sites of adenine.核酸酶SP:一种来自菠菜的新型酶,优先在腺嘌呤位点切割受损的双链DNA。
Nucleic Acids Res. 1988 Jul 25;16(14B):6935-52. doi: 10.1093/nar/16.14.6935.
7
High-throughput identification of mutations using a combination of CEL I fragmentation and SAGE technology.结合CEL I酶切片段化和SAGE技术进行突变的高通量鉴定。
Genet Test Mol Biomarkers. 2009 Feb;13(1):97-103. doi: 10.1089/gtmb.2008.0078.
8
Alternatively spliced mRNA variants of chloroplast ascorbate peroxidase isoenzymes in spinach leaves.菠菜叶片中叶绿体抗坏血酸过氧化物酶同工酶的可变剪接mRNA变体
Biochem J. 1999 Feb 15;338 ( Pt 1)(Pt 1):41-8.
9
The carboxyterminal processing protease of D1 protein: expression, purification and enzymology of the recombinant and native spinach proteins.
Pest Manag Sci. 2005 Jul;61(7):682-90. doi: 10.1002/ps.1038.
10
Mismatch cleavage by single-strand specific nucleases.单链特异性核酸酶介导的错配切割
Nucleic Acids Res. 2004 May 11;32(8):2632-41. doi: 10.1093/nar/gkh599. Print 2004.

引用本文的文献

1
Gene Editing of the Follicle-Stimulating Hormone Gene to Sterilize Channel Catfish, , Using a Modified Transcription Activator-like Effector Nuclease Technology with Electroporation.利用改良的转录激活样效应核酸酶技术结合电穿孔对斑点叉尾鮰促卵泡激素基因进行基因编辑以使其绝育
Biology (Basel). 2023 Mar 1;12(3):392. doi: 10.3390/biology12030392.
2
INDEL detection, the 'Achilles heel' of precise genome editing: a survey of methods for accurate profiling of gene editing induced indels.INDEL 检测是精确基因组编辑的“阿喀琉斯之踵”:基因编辑诱导 INDEL 精确分析方法综述。
Nucleic Acids Res. 2020 Dec 2;48(21):11958-11981. doi: 10.1093/nar/gkaa975.
3

本文引用的文献

1
Surveyor nuclease-based genotyping of SNPs.基于Surveyor核酸酶的单核苷酸多态性基因分型
Clin Lab. 2006;52(7-8):385-6.
2
Methods for reverse genetic screening in zebrafish by resequencing and TILLING.通过重测序和定向诱导基因组局部突变技术在斑马鱼中进行反向遗传筛选的方法。
Methods. 2006 Jul;39(3):220-7. doi: 10.1016/j.ymeth.2006.04.012.
3
A new detection method for ATRX gene mutations using a mismatch-specific endonuclease.一种使用错配特异性核酸内切酶检测ATRX基因突变的新方法。
Fast and Inexpensive Phenotyping and Genotyping Methods for Evaluation of Barley Mutant Population.
用于评估大麦突变群体的快速且低成本的表型分析和基因分型方法
Plants (Basel). 2020 Sep 6;9(9):1153. doi: 10.3390/plants9091153.
4
COTIP: Cotton TILLING Platform, a Resource for Plant Improvement and Reverse Genetic Studies.COTIP:棉花定向诱导基因组局部突变平台,植物改良和反向遗传学研究的资源。
Front Plant Sci. 2016 Dec 26;7:1863. doi: 10.3389/fpls.2016.01863. eCollection 2016.
5
Identification of a type I Ca2+/Mg2+-dependent endonuclease induced in maize cells exposed to camptothecin.鉴定在喜树碱处理的玉米细胞中诱导产生的一种Ⅰ型 Ca2+/Mg2+-依赖性核酸内切酶。
BMC Plant Biol. 2013 Nov 20;13:186. doi: 10.1186/1471-2229-13-186.
6
Error correction in gene synthesis technology.基因合成技术中的纠错。
Trends Biotechnol. 2012 Mar;30(3):147-54. doi: 10.1016/j.tibtech.2011.10.002. Epub 2011 Dec 28.
Am J Med Genet A. 2006 Jul 15;140(14):1519-23. doi: 10.1002/ajmg.a.31310.
4
Genetic predictors of adverse radiotherapy effects: the Gene-PARE project.放疗不良反应的基因预测指标:基因-放疗不良反应风险评估(Gene-PARE)项目
Int J Radiat Oncol Biol Phys. 2006 Jul 1;65(3):646-55. doi: 10.1016/j.ijrobp.2006.03.006.
5
High-throughput TILLING for Arabidopsis.拟南芥的高通量定向诱导基因组局部突变技术
Methods Mol Biol. 2006;323:127-35. doi: 10.1385/1-59745-003-0:127.
6
EMS mutagenesis of Arabidopsis.拟南芥的EMS诱变
Methods Mol Biol. 2006;323:101-3. doi: 10.1385/1-59745-003-0:101.
7
Characterization of a periplasmic S1-like nuclease coded by the Mesorhizobium loti symbiosis island.由百脉根中生根瘤菌共生岛编码的一种周质S1样核酸酶的特性分析
Biochem Biophys Res Commun. 2006 Apr 28;343(1):77-84. doi: 10.1016/j.bbrc.2006.02.117. Epub 2006 Feb 28.
8
A rapid and sensitive enzymatic method for epidermal growth factor receptor mutation screening.一种用于表皮生长因子受体突变筛查的快速灵敏的酶法。
Clin Cancer Res. 2006 Feb 1;12(3 Pt 1):751-8. doi: 10.1158/1078-0432.CCR-05-2047.
9
Chemical- and irradiation-induced mutants of indica rice IR64 for forward and reverse genetics.用于正向和反向遗传学研究的籼稻IR64化学诱变和辐射诱变突变体。
Plant Mol Biol. 2005 Sep;59(1):85-97. doi: 10.1007/s11103-004-5112-0.
10
Temperature-mediated heteroduplex analysis for the detection of drug-resistant gene mutations in clinical isolates of Mycobacterium tuberculosis by denaturing HPLC, SURVEYOR nuclease.通过变性高效液相色谱法、SURVEYOR核酸酶进行温度介导的异源双链分析,以检测结核分枝杆菌临床分离株中的耐药基因突变
Microbes Infect. 2006 Jan;8(1):128-35. doi: 10.1016/j.micinf.2005.06.008. Epub 2005 Aug 10.