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基于分子和形态学数据的狮子鱼(硬骨鱼纲:狮子鱼科)系统发育研究

Phylogeny of the snailfishes (Teleostei: Liparidae) based on molecular and morphological data.

作者信息

Knudsen S W, Møller P R, Gravlund P

机构信息

Zoological Museum, Natural History Museum of Denmark, University of Copenhagen, Universitetsparken 15, 2100-DK Copenhagen Ø, Denmark.

出版信息

Mol Phylogenet Evol. 2007 Aug;44(2):649-66. doi: 10.1016/j.ympev.2007.04.005. Epub 2007 Apr 21.

DOI:10.1016/j.ympev.2007.04.005
PMID:17544302
Abstract

Liparidae (snailfishes) is one of the most diverse and abundant fish families in polar and deep-sea habitats. However, the evolution of this family is poorly known because of the rarity of many species and difficulties in scoring morphological characters. We perform phylogenetic analyses of Liparidae using sequences from two mtDNA genes, 16S (585 bp) and cytochrome b (426 bp), and 84 morphological characters from 24 species of Liparidae and 4 species of Cyclopteridae (outgroup). The present study confirms earlier hypotheses that the shallow-water genera, such as Liparis and Crystallichthys, occupy basal positions and that deep-water genera, such as Careproctus, Elassodiscus, Rhinoliparis, Paraliparis, Rhodichthys and Psednos, are increasingly derived. The later two genera form a terminal clade which does not include Paraliparis. The topology shows that the family has undergone a reductive type of evolution, with a gradual loss of characters (e.g. sucking disc/pelvic fins, pseudobranchial filaments, skin spinules). Nectoliparis, which had previously been placed either as the basal most genus or among the most derived genera, are found to occupy the most basal position among the taxa analyzed. This result indicates that the sucking disc has been lost at least twice during the evolution of the Liparidae. The basal position of Nectoliparis is supported by its plesiomorphic otolith morphology, whereas an advanced overgrown otolith ostium, unique among teleosts, is found to be apomorphic for a clade containing the derived genera: Paraliparis, Psednos, Rhinoliparis and Rhodichthys. We also identify the presence of probable nuclear inserts of mitochondrial DNA (Numts) in three species of Careproctus and in Elassodiscus caudatus.

摘要

狮子鱼科(狮子鱼)是极地和深海栖息地中最多样化且数量丰富的鱼类家族之一。然而,由于许多物种稀有且难以对形态特征进行评分,该家族的进化情况鲜为人知。我们利用来自两个线粒体DNA基因(16S,585碱基对;细胞色素b,426碱基对)的序列以及来自24种狮子鱼科和4种圆鳍鱼科(外类群)的84个形态特征,对狮子鱼科进行了系统发育分析。本研究证实了早期的假设,即浅水属,如狮子鱼属和晶鱼属,占据基部位置,而深水属,如隐棘杜父鱼属、软杜父鱼属、鼻棘杜父鱼属、副狮子鱼属、红杜父鱼属和拟狮子鱼属,则是逐渐演化而来。后两个属形成一个终端分支,其中不包括副狮子鱼属。系统发育树拓扑结构表明,该家族经历了一种简化型的进化,特征逐渐丧失(如吸盘/腹鳍、伪鳃丝、皮肤小刺)。之前被置于最基部属或最进化属之间的裸狮子鱼属,在分析的分类单元中被发现占据最基部位置。这一结果表明,在狮子鱼科的进化过程中,吸盘至少丧失了两次。裸狮子鱼属的基部位置由其近裔形态的耳石形态支持,而在硬骨鱼中独特的、高度发达的耳石孔,则被发现是包含进化属(副狮子鱼属、拟狮子鱼属、鼻棘杜父鱼属和红杜父鱼属)的分支的衍征。我们还在三种隐棘杜父鱼属和长尾软杜父鱼中鉴定出线粒体DNA的可能核插入序列(Numts)的存在。

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