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鱿鱼视紫红质的结晶及晶体性质

Crystallization and crystal properties of squid rhodopsin.

作者信息

Murakami Midori, Kitahara Rei, Gotoh Toshiaki, Kouyama Tsutomu

机构信息

Department of Physics, Graduate School of Science, Nagoya University, Nagoya, Japan.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007 Jun 1;63(Pt 6):475-9. doi: 10.1107/S1744309107017423. Epub 2007 May 5.

Abstract

Rhodopsin, a photoreceptor membrane protein in the retina, is a prototypical member of the G-protein-coupled receptor family. In this study, rhodopsin from the retina of the squid Todarodes pacificus was treated with V8 protease to remove the C-terminal extension. Truncated rhodopsin was selectively extracted from the microvillar membranes using alkyl glucoside in the presence of zinc ions and was then crystallized by the sitting-drop vapour-diffusion method. Of the various crystals obtained, hexagonal crystals grown in the presence of octylglucoside and ammonium sulfate diffracted to 2.8 A resolution. The diffraction data suggested that the crystal belongs to space group P6(2), with unit-cell parameters a = b = 122.1, c = 158.6 A. Preliminary crystallographic analysis, together with linear dichroism results, suggested that the rhodopsin dimers are packed in such a manner that their transmembrane helices are aligned nearly parallel to the c axis.

摘要

视紫红质是视网膜中的一种光感受器膜蛋白,是G蛋白偶联受体家族的典型成员。在本研究中,用V8蛋白酶处理太平洋褶柔鱼视网膜中的视紫红质,以去除其C末端延伸部分。在锌离子存在的情况下,使用烷基葡糖苷从微绒毛膜中选择性提取截短的视紫红质,然后通过坐滴气相扩散法使其结晶。在获得的各种晶体中,在辛基葡糖苷和硫酸铵存在下生长的六方晶体的衍射分辨率达到2.8 Å。衍射数据表明该晶体属于空间群P6(2),晶胞参数a = b = 122.1,c = 158.6 Å。初步晶体学分析以及线性二色性结果表明,视紫红质二聚体以其跨膜螺旋几乎平行于c轴排列的方式堆积。

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Crystallization and crystal properties of squid rhodopsin.鱿鱼视紫红质的结晶及晶体性质
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本文引用的文献

1
Crystal structure of a photoactivated deprotonated intermediate of rhodopsin.视紫红质光激活去质子化中间体的晶体结构。
Proc Natl Acad Sci U S A. 2006 Oct 31;103(44):16123-8. doi: 10.1073/pnas.0608022103. Epub 2006 Oct 23.
4
Structure of bovine rhodopsin in a trigonal crystal form.三角晶型牛视紫红质的结构
J Mol Biol. 2004 Nov 5;343(5):1409-38. doi: 10.1016/j.jmb.2004.08.090.
8
The rhodopsin system of the squid.鱿鱼的视紫红质系统。
J Gen Physiol. 1958 Jan 20;41(3):501-28. doi: 10.1085/jgp.41.3.501.

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