Suppr超能文献

通过实验进化测试最优性:噬菌体的裂解时间

Testing optimality with experimental evolution: lysis time in a bacteriophage.

作者信息

Heineman Richard H, Bull James J

机构信息

Section of Integrative Biology, University of Texas, Austin, Texas 78712, USA.

出版信息

Evolution. 2007 Jul;61(7):1695-709. doi: 10.1111/j.1558-5646.2007.00132.x.

Abstract

Optimality models collapse the vagaries of genetics into simple trade-offs to calculate phenotypes expected to evolve by natural selection. Optimality approaches are commonly criticized for this neglect of genetic details, but resolution of this disagreement has been difficult. The importance of genetic details may be tested by experimental evolution of a trait for which an optimality model exists and in which genetic details can be studied. Here we evolved lysis time in bacteriophage T7, a virus of Escherichia coli. Lysis time is equivalent to the age of reproduction in an organism that reproduces once and then dies. Delaying lysis increases the number of offspring but slows generation time, and this trade-off renders the optimum sensitive to environmental conditions: earlier lysis is favored when bacterial hosts are dense, later lysis is favored when hosts are sparse. In experimental adaptations, T7 evolved close to the optimum in conditions favoring early lysis but not in conditions favoring late lysis. One of the late lysis adaptations exhibited no detectable phenotypic evolution despite genetic evolution; the other evolved only partly toward the expected optimum. Overall, the lysis time of the adapted phages remained closer to their starting values than predicted by the model. From the perspective of the optimality model, the experimental conditions were expected to select changes only along the postulated trade-off, but a trait outside the trade-off evolved as well. Evidence suggests that the model's failure ultimately stems from a violation of the trade-off, rather than a paucity of mutations.

摘要

最优性模型将遗传学的变幻莫测简化为简单的权衡,以计算预期通过自然选择进化而来的表型。最优性方法常因忽视遗传细节而受到批评,但解决这一争议一直很困难。对于存在最优性模型且能研究遗传细节的性状,可以通过实验进化来检验遗传细节的重要性。在此,我们对大肠杆菌病毒噬菌体T7的裂解时间进行了进化研究。裂解时间相当于一个繁殖一次后就死亡的生物体的繁殖年龄。延迟裂解会增加后代数量,但会延长世代时间,这种权衡使得最优解对环境条件敏感:当细菌宿主密集时,较早裂解更有利;当宿主稀疏时,较晚裂解更有利。在实验适应性研究中,T7在有利于早期裂解的条件下进化得接近最优解,但在有利于晚期裂解的条件下并非如此。其中一种晚期裂解适应性尽管发生了遗传进化,但未表现出可检测到的表型进化;另一种仅部分朝着预期的最优解进化。总体而言,适应后的噬菌体的裂解时间比模型预测的更接近其初始值。从最优性模型的角度来看,实验条件预计只会沿着假定的权衡选择变化,但权衡之外的一个性状也发生了进化。有证据表明,该模型的失败最终源于对权衡的违背,而非突变的匮乏。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d154/1974807/5fb117d3c7a6/i0014-3820-61-7-1695-f01.jpg

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验