Ro Hyeon-Su, Kim Sung Soon, Ryu Jae San, Jeon Che-Ok, Lee Tae Soo, Lee Hyun-Sook
Department of Microbiology and Research Institute of Life Science, Gyeongsang National University, 900 Gajwa-Dong, Chinju 660-701, Korea.
Mycol Res. 2007 Jun;111(Pt 6):710-5. doi: 10.1016/j.mycres.2007.03.016. Epub 2007 Apr 6.
Verification of Pleurotus eryngii strains was assessed using ITS sequence analysis and RAPD fingerprinting. Sequence analysis of the ITS1-5.8S rDNA-ITS2 region of 24 strains of Pleurotus sp., which consisted of 22 strains of P. eryngii and the control strains P. ostreatus and P. ferulae, demonstrated that the DNA regions share mostly 99% sequence identity, indicating that sequence-based analysis is not applicable for the verification of closely related mushroom strains. To verify the mushroom strains using RAPD, we amplified DNA fragments from the total cellular DNA of 24 mushroom strains with 18 different random primers, yielding 538 distinct DNA fragments ranging from 200-4000bp. Analysis of the DNA fragment pattern showed that the 22 P. eryngii strains were clearly distinguished from the control strains P. ostreatus and P. ferulae, and could be categorized into five subgroups. Subsequent physiological studies on the development of fruiting bodies demonstrated the close correlation of the RAPD-based grouping with the phenotypical characteristics of mushroom fruiting bodies.
使用ITS序列分析和RAPD指纹图谱对杏鲍菇菌株进行鉴定。对24株侧耳属菌株(包括22株杏鲍菇菌株以及对照菌株糙皮侧耳和平菇)的ITS1-5.8S rDNA-ITS2区域进行序列分析,结果表明这些DNA区域的序列相似度大多为99%,这表明基于序列的分析不适用于亲缘关系相近的蘑菇菌株的鉴定。为了使用RAPD对蘑菇菌株进行鉴定,我们用18种不同的随机引物从24株蘑菇菌株的总细胞DNA中扩增DNA片段,得到了538个不同的DNA片段,大小在200-4000bp之间。对DNA片段模式的分析表明,22株杏鲍菇菌株与对照菌株糙皮侧耳和平菇有明显区别,并且可以分为五个亚组。随后对子实体发育的生理研究表明,基于RAPD的分组与蘑菇子实体的表型特征密切相关。