Center for Neuroscience and Aging, Burnham Institute for Medical Research, La Jolla, California, United States of America.
PLoS One. 2007 Jul 11;2(7):e601. doi: 10.1371/journal.pone.0000601.
Common diseases may be attributed to combinations of variant alleles, but there are few model systems where the interactions among such variants can be studied in controlled genetic crosses. While association studies are designed to detect common polymorphisms of moderate effect, new approaches are required to characterize the impact on disease of interactions among rare alleles.
METHODOLOGY/PRINCIPAL FINDINGS: We show that wild populations of Drosophila melanogaster harbor rare polymorphisms of major effect (RAME) that predispose flies to a specific disease phenotype, age-dependent cardiac dysfunction. A screen of fifty inbred wild-type lines revealed a continuous spectrum of pacing-induced heart failure that generally increases in frequency with age. High-speed video analysis of the inbred lines with high rates of inducible heart failure indicates specific defects in cardiac function, including arrhythmias and contractile disorders ('cardiomyopathies'). A combination of bulked segregant analysis and single feature polymorphism (SFP) detection localizes one of the cardiac susceptibility loci to the 97C interval on the fly genome.
CONCLUSIONS/SIGNIFICANCE: Wild-type Drosophila, like humans, are predisposed to cardiac dysfunction. Identification of factors associated with these naturally occurring cardiac traits promises to provide important insights into the epidemiology of cardiac disease.
常见疾病可能归因于变异等位基因的组合,但在少数模型系统中,可以在受控的遗传杂交中研究这些变体之间的相互作用。虽然关联研究旨在检测具有中等效应的常见多态性,但需要新的方法来描述稀有等位基因相互作用对疾病的影响。
方法/主要发现:我们表明,黑腹果蝇的野生种群中存在导致特定疾病表型(年龄依赖性心脏功能障碍)易感性的罕见、大效应多态性(RAME)。对五十个近交野生型品系的筛选显示出起搏诱导性心力衰竭的连续频谱,通常随年龄增加而增加。对诱导心力衰竭率高的近交系进行高速视频分析表明存在特定的心脏功能缺陷,包括心律失常和收缩障碍(“心肌病”)。大量分离群体分析和单特征多态性(SFP)检测的组合将一个心脏易感性位点定位到果蝇基因组的 97C 区间。
结论/意义:像人类一样,野生型果蝇易患心脏功能障碍。鉴定与这些自然发生的心脏特征相关的因素有望为心脏疾病的流行病学提供重要的见解。