Adelfinskaya O, Terrazas M, Froeyen M, Marlière P, Nauwelaerts K, Herdewijn P
Rega Institute for Medical Research, Katholieke Universiteit Leuven, Department of Pharmaceutical Chemistry, Minderbroedersstraat 10, 3000 Leuven, Belgium.
Nucleic Acids Res. 2007;35(15):5060-72. doi: 10.1093/nar/gkm498. Epub 2007 Jul 25.
Some selected amino acids, in particular L-aspartic acid (L-Asp) and L-histidine (L-His), can function as leaving group during polymerase-catalyzed incorporation of deoxyadenosine monophosphate (dAMP) in DNA. Although L-Asp-dAMP and L-His-dAMP bind, most probably, in a different way in the active site of the enzyme, aspartic acid and histidine can be considered as mimics of the pyrophosphate moiety of deoxyadenosine triphosphate. L-Aspartic acid is more efficient than D-aspartic acid as leaving group. Such P-N conjugates of amino acids and deoxynucleotides provide a novel experimental ground for diversifying nucleic acid metabolism in the field of synthetic biology.
一些特定的氨基酸,特别是L-天冬氨酸(L-Asp)和L-组氨酸(L-His),在DNA聚合酶催化的脱氧腺苷单磷酸(dAMP)掺入过程中可作为离去基团发挥作用。尽管L-Asp-dAMP和L-His-dAMP很可能以不同方式结合在酶的活性位点中,但天冬氨酸和组氨酸可被视为脱氧三磷酸腺苷焦磷酸部分的模拟物。L-天冬氨酸作为离去基团比D-天冬氨酸更有效。这种氨基酸与脱氧核苷酸的P-N缀合物为合成生物学领域中核酸代谢的多样化提供了新的实验基础。