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核苷酸-α-氨基酸共聚物作为进化早期参与者的化学可能性。

The Chemical Likelihood of Ribonucleotide-α-Amino acid Copolymers as Players for Early Stages of Evolution.

机构信息

IBMM, University of Montpellier, CNRS, ENSCM, Montpellier, France.

MRC Laboratory of Molecular Biology, Cambridge Biomedical Campus, Cambridge, CB2 0QH, UK.

出版信息

J Mol Evol. 2019 Apr;87(2-3):83-92. doi: 10.1007/s00239-019-9887-7. Epub 2019 Feb 20.

Abstract

How ribosomal translation could have evolved remains an open question in most available scenarios for the early developments of life. Rather than considering RNA and peptides as two independent systems, this work is aimed at assessing the possibility of formation and stability of co-polymers or co-oligomers of α-amino acids and nucleotides from which translation might have evolved. Here we show that the linkages required to build such mixed structures have lifetimes of several weeks to months at neutral pH and 20 °C owing to the mutual protecting effect of both neighboring phosphoramidate and ester functional groups increasing their stability by factors of about 1 and 3 orders of magnitude, respectively. This protecting effect is reversible upon hydrolysis allowing the possibility of subsequent reactions. These copolymer models, for which an abiotic synthesis pathway is supported by experiments, form a basis from which both polymerization and translation could have logically evolved. Low temperatures were identified as a critical parameter for the kinetic stability of the aminoacylated nucleotide facilitating the synthesis of the model. This observation independently supports the views that any process involving RNA aminoacyl esters, outstandingly including the emergence of translation, was more probable at 0 °C or below and might be considered a kinetic marker constraining the environment in which translation has evolved.

摘要

核糖体翻译是如何进化的,在生命早期发展的大多数现有情景中仍然是一个悬而未决的问题。这项工作的目的不是将 RNA 和肽视为两个独立的系统,而是评估从翻译可能进化而来的α-氨基酸和核苷酸的共聚物或共低聚物的形成和稳定性的可能性。在这里,我们表明,由于相邻的磷酰胺酯和酯官能团的相互保护作用,构建这种混合结构所需的键在中性 pH 值和 20°C 下的寿命为数周至数月,其稳定性分别提高了约 1 和 3 个数量级。这种保护作用在水解时是可逆的,允许随后进行反应。这些共聚物模型的非生物合成途径得到了实验的支持,为聚合和翻译的逻辑进化提供了基础。低温被确定为氨基酸核苷酸的动力学稳定性的关键参数,有利于模型的合成。这一观察结果独立地支持了以下观点,即在任何涉及 RNA 氨酰酯的过程中,特别是包括翻译的出现,在 0°C 或以下的温度下更有可能发生,并且可以被认为是限制翻译进化环境的动力学标记。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3171/6443614/5c8f0a3739a8/239_2019_9887_Sch1_HTML.jpg

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