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新种溶纤维素嗜放射菌,从空气中分离得到。

Deinococcus cellulosilyticus sp. nov., isolated from air.

作者信息

Weon Hang-Yeon, Kim Byung-Yong, Schumann Peter, Son Jung-A, Jang Jaeseon, Go Seung-Joo, Kwon Soon-Wo

机构信息

Applied Microbiology Division, National Institute of Agricultural Science and Technology, Rural Development Administration, Suwon 441-707, Republic of Korea.

Korean Agricultural Culture Collection (KACC), Microbial Genetics Division, National Institute of Agricultural Biotechnology, Rural Development Administration, Suwon 441-707, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2007 Aug;57(Pt 8):1685-1688. doi: 10.1099/ijs.0.64951-0.

Abstract

A pink-coloured bacterial strain, 5516J-15(T), was isolated from an air sample from Jeju Island, Republic of Korea. The organism was found to have resistance to UV radiation typical of members of the genus Deinococcus, and it was placed within the radiation of the Deinococcus on a phylogenetic tree based on 16S rRNA gene sequences. Strain 5516J-15(T) shared low 16S rRNA gene sequence similarity (84.5-87.8 %) with Deinococcus species, showing highest sequence similarity to Deinococcus deserti VCD115(T) (87.8 %) and Deinococcus indicus Wt/1a(T) (87.8 %). Strain 5516J-15(T) had type A3 beta peptidoglycan with l-ornithine, menaquinone 8 (MK-8) as the major quinone and iso-C(12 : 0), anteiso-C(13 : 0), iso-C(16 : 0) and C(16 : 0) as the major fatty acids. Its polar lipid profile contained three unknown aminophospholipids, two unknown polar lipids, one unknown phospholipid and one unknown glycolipid. The DNA G+C content of strain 5516J-15(T) was 61.3 mol%. Based on the phylogenetic and phenotypic data presented, it is proposed that the unknown strain should be classified within a novel species in the genus Deinococcus with the name Deinococcus cellulosilyticus sp. nov. The type strain is 5516J-15(T) (=KACC 11606(T) =DSM 18568(T)).

摘要

从大韩民国济州岛的空气样本中分离出一株粉红色的细菌菌株5516J-15(T)。发现该菌株具有嗜皮菌属成员典型的抗紫外线特性,并且基于16S rRNA基因序列,它在嗜皮菌属的系统发育树中位于嗜皮菌属的辐射范围内。菌株5516J-15(T)与嗜皮菌属物种的16S rRNA基因序列相似性较低(84.5 - 87.8%),与嗜皮沙漠杆菌VCD115(T)(87.8%)和嗜皮印度杆菌Wt/1a(T)(87.8%)的序列相似性最高。菌株5516J-15(T)具有含L-鸟氨酸的A3型β-肽聚糖,以甲基萘醌8(MK-8)作为主要醌类,以异-C(12 : 0)、anteiso-C(13 : 0)、异-C(16 : 0)和C(16 : 0)作为主要脂肪酸。其极性脂质谱包含三种未知的氨基磷脂、两种未知的极性脂质、一种未知的磷脂和一种未知的糖脂。菌株5516J-15(T)的DNA G+C含量为61.3 mol%。基于所呈现的系统发育和表型数据,建议将该未知菌株归类为嗜皮菌属中的一个新物种,命名为嗜皮解纤维素菌(Deinococcus cellulosilyticus sp. nov.)。模式菌株为5516J-15(T)(=KACC 11606(T) =DSM 18568(T))。

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