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加拿大希瓦氏菌新种及大西洋希瓦氏菌新种,可还原二氧化锰和六氢化-1,3,5-三硝基-1,3,5-三嗪的嗜冷海洋细菌。

Shewanella canadensis sp. nov. and Shewanella atlantica sp. nov., manganese dioxide- and hexahydro-1,3,5-trinitro-1,3,5-triazine-reducing, psychrophilic marine bacteria.

作者信息

Zhao Jian-Shen, Manno Dominic, Thiboutot Sonia, Ampleman Guy, Hawari Jalal

机构信息

Biotechnology Research Institute, National Research Council of Canada, 6100 Royalmount Ave, Montreal, Quebec H4P 2R2, Canada.

Defence Research and Development Canada, 2459 Pie IX Boulevard, Valcartier, Quebec G3J 1X5, Canada.

出版信息

Int J Syst Evol Microbiol. 2007 Sep;57(Pt 9):2155-2162. doi: 10.1099/ijs.0.64596-0.

Abstract

Two strains belonging to the genus Shewanella, HAW-EB2(T) and HAW-EB5(T), were isolated previously from marine sediment sampled from the Atlantic Ocean, near Halifax harbour in Canada, for their potential to degrade explosive hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX). In the present study, strains HAW-EB2(T) and HAW-EB5(T) were found to display high 16S rRNA gene sequence similarity (90-99.5 %) to species of Shewanella, but their gyrB sequences were significantly different from each other and from species of Shewanella (79-87.6 %). Furthermore, DNA-DNA hybridization showed that the genomic DNA of the two strains was only 22 % related and showed less than 41 % relatedness to closely related species of Shewanella. In comparison to other species of Shewanella, strains HAW-EB2(T) and HAW-EB5(T) were also unique in some phenotypic properties such as activities of beta-galactosidase and tyrosine arylamidase and the ability to metabolize certain organic acids and sugars. Both strains HAW-EB2(T) and HAW-EB5(T) utilize malate, valerate, peptone and yeast extract as sole carbon and energy sources. The major membrane fatty acids of the two strains were C(14 : 0), iso-C(15 : 0), C(16 : 0), C(16 : 1)omega7, C(18 : 1)omega7 and C(20 : 5)omega3 and their major quinones were Q-7, Q-8 and MK-7. On the basis of these results, strain HAW-EB2(T) (=NCIMB 14238(T) =CCUG 54553(T)) is proposed as the type strain of Shewanella canadensis sp. nov. and strain HAW-EB5(T) (=NCIMB 14239(T) =CCUG 54554(T)) is proposed as the type strain of Shewanella atlantica sp. nov.

摘要

先前从加拿大哈利法克斯港附近大西洋采集的海洋沉积物中分离出两株希瓦氏菌属菌株,即HAW-EB2(T)和HAW-EB5(T),因其具有降解爆炸性六氢-1,3,5-三硝基-1,3,5-三嗪(RDX)的潜力。在本研究中,发现菌株HAW-EB2(T)和HAW-EB5(T)与希瓦氏菌属物种的16S rRNA基因序列相似度较高(90-99.5%),但其gyrB序列彼此之间以及与希瓦氏菌属物种均存在显著差异(79-87.6%)。此外,DNA-DNA杂交显示这两株菌株的基因组DNA仅22%相关,与希瓦氏菌属的近缘物种的相关性低于41%。与其他希瓦氏菌属物种相比,菌株HAW-EB2(T)和HAW-EB5(T)在某些表型特性方面也具有独特性,如β-半乳糖苷酶和酪氨酸芳基酰胺酶的活性以及代谢某些有机酸和糖类的能力。菌株HAW-EB2(T)和HAW-EB5(T)均利用苹果酸、戊酸、蛋白胨和酵母提取物作为唯一碳源和能源。这两株菌株的主要膜脂肪酸为C(14 : 0)、异-C(15 : 0)、C(16 : 0)、C(16 : 1)ω7、C(18 : 1)ω7和C(20 : 5)ω3,其主要醌类为Q-7、Q-8和MK-7。基于这些结果,提议将菌株HAW-EB2(T)(=NCIMB 14238(T) =CCUG 54553(T))作为加拿大希瓦氏菌新种的模式菌株,将菌株HAW-EB5(T)(=NCIMB 14239(T) =CCUG 54554(T))作为大西洋希瓦氏菌新种的模式菌株。

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