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该家族细胞外电子转移网络的新见解:揭示水平基因转移的潜在意义。

Novel Insights on Extracellular Electron Transfer Networks in the Family: Unveiling the Potential Significance of Horizontal Gene Transfer.

作者信息

Gonzalez Valentina, Abarca-Hurtado Josefina, Arancibia Alejandra, Claverías Fernanda, Guevara Miguel R, Orellana Roberto

机构信息

Laboratorio de Biología Celular y Ecofisiología Microbiana, Facultad de Ciencias Naturales y Exactas, Universidad de Playa Ancha, Leopoldo Carvallo 270, Valparaíso 2360001, Chile.

Laboratorio de Microbiología Molecular y Biotecnología Ambiental, Departamento de Química & Centro de Biotecnología Daniel Alkalay-Lowitt, Universidad Técnica Federico Santa María, Avenida España 1680, Valparaíso 2390123, Chile.

出版信息

Microorganisms. 2024 Aug 29;12(9):1796. doi: 10.3390/microorganisms12091796.

Abstract

Some sulfate-reducing bacteria (SRB), mainly belonging to the family, have evolved the capability to conserve energy through microbial extracellular electron transfer (EET), suggesting that this process may be more widespread than previously believed. While previous evidence has shown that mobile genetic elements drive the plasticity and evolution of SRB and iron-reducing bacteria (FeRB), few have investigated the shared molecular mechanisms related to EET. To address this, we analyzed the prevalence and abundance of EET elements and how they contributed to their differentiation among 42 members of the family and 23 and 59 members of and , respectively. Proteins involved in EET, such as the cytochromes PpcA and CymA, the outer membrane protein OmpJ, and the iron-sulfur cluster-binding CbcT, exhibited widespread distribution within . Some of these showed modular diversification. Additional evidence revealed that horizontal gene transfer was involved in the acquiring and losing of critical genes, increasing the diversification and plasticity between the three families. The results suggest that specific EET genes were widely disseminated through horizontal transfer, where some changes reflected environmental adaptations. These findings enhance our comprehension of the evolution and distribution of proteins involved in EET processes, shedding light on their role in iron and sulfur biogeochemical cycling.

摘要

一些主要属于该家族的硫酸盐还原菌(SRB)已经进化出通过微生物细胞外电子转移(EET)来保存能量的能力,这表明该过程可能比以前认为的更为普遍。虽然先前的证据表明移动遗传元件驱动了SRB和铁还原菌(FeRB)的可塑性和进化,但很少有人研究与EET相关的共同分子机制。为了解决这个问题,我们分析了EET元件的普遍性和丰度,以及它们如何分别促成了该家族42个成员以及另外两个家族的23个和59个成员之间的分化。参与EET的蛋白质,如细胞色素PpcA和CymA、外膜蛋白OmpJ以及铁硫簇结合蛋白CbcT,在该家族中广泛分布。其中一些表现出模块化的多样化。额外的证据表明,水平基因转移参与了关键基因的获取和丢失,增加了这三个家族之间的多样化和可塑性。结果表明,特定的EET基因通过水平转移广泛传播,其中一些变化反映了环境适应性。这些发现增强了我们对参与EET过程的蛋白质的进化和分布的理解,揭示了它们在铁和硫生物地球化学循环中的作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b031/11434368/5e88e43a2d70/microorganisms-12-01796-g001.jpg

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