Department of Microbiology, Chungbuk National University, Cheongju 361-763, Republic of Korea.
Biological Resources Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon 305-806, Republic of Korea.
Int J Syst Evol Microbiol. 2012 May;62(Pt 5):1128-1133. doi: 10.1099/ijs.0.031401-0. Epub 2011 Jul 1.
Two strains of dissimilatory iron-reducing bacteria, which could couple lactate oxidation to iron reduction for energy conservation, were isolated from Arctic marine sediment. The strains, IR12(T) and IR26, were both Gram-staining-negative, catalase- and oxidase-positive and facultative anaerobes. Their cells were rod-shaped and motile by means of a polar flagellum. Both strains grew in the presence of 0.5-3.5 % (w/v) NaCl, with an absolute requirement for Na(+). Both were psychrotolerant since they could grow at 4-28 °C but had an optimum growth temperature of 20 °C. Both grew at pH 4.5-9.0 (optimum, pH 7.5). The major fatty acids of strains IR12(T) and IR26 were summed feature 3 (C(16 : 1)ω6c and/or C(16 : 1)ω7c) and C(16 : 0). Phylogenetic analyses based on 16S rRNA gene sequences indicated that strains IR12(T) and IR26 belonged to the class Gammaproteobacteria and were most closely related to Shewanella vesiculosa M7(T), Shewanella livingstonensis NF22(T) and Shewanella frigidimarina ACAM 591(T) (with 98.5 and 98.8 %, 98.5 and 98.8 %, and 98.5 and 98.8 % sequence similarities, respectively). The genomic DNA G+C contents of strains IR12(T) and IR26 were 40.0 and 40.3 mol%, respectively. DNA-DNA relatedness data indicated that the two novel strains represented a single species that was distinct from S. vesiculosa M7(T), S. livingstonensis NF22(T) and S. frigidimarina ACAM 591(T). Based on the phylogenetic, phenotypic and DNA-DNA relatedness data, the two new strains represent a single novel species of the genus Shewanella, for which the name Shewanella arctica sp. nov. is proposed. The type strain is IR12(T) ( = KCTC 23109(T) = JCM 16723(T)).
两株异化铁还原菌从北极海洋沉积物中分离出来,它们可以将乳酸氧化与铁还原偶联以节约能量。这两株菌,IR12(T)和 IR26,革兰氏染色阴性,过氧化氢酶和氧化酶阳性,兼性厌氧菌。它们的细胞呈杆状,通过极生鞭毛运动。两株菌均能在 0.5-3.5%(w/v)NaCl 中生长,绝对需要钠离子。两株菌均为嗜冷菌,因为它们可以在 4-28°C 下生长,但最适生长温度为 20°C。两株菌在 pH4.5-9.0(最适 pH7.5)下生长。IR12(T)和 IR26 两株菌的主要脂肪酸为总和特征 3(C(16 : 1)ω6c 和/或 C(16 : 1)ω7c)和 C(16 : 0)。基于 16S rRNA 基因序列的系统发育分析表明,IR12(T)和 IR26 两株菌属于γ变形菌纲,与 Shewanella vesiculosa M7(T)、Shewanella livingstonensis NF22(T)和 Shewanella frigidimarina ACAM 591(T)最为密切相关(序列相似度分别为 98.5%和 98.8%、98.5%和 98.8%以及 98.5%和 98.8%)。IR12(T)和 IR26 两株菌的基因组 DNA G+C 含量分别为 40.0mol%和 40.3mol%。DNA-DNA 同源性数据表明,这两个新菌株代表了一个与 S. vesiculosa M7(T)、S. livingstonensis NF22(T)和 S. frigidimarina ACAM 591(T)不同的单一物种。基于系统发育、表型和 DNA-DNA 同源性数据,这两个新菌株代表了 Shewanella 属的一个新种,命名为 Shewanella arctica sp. nov.。模式菌株为 IR12(T)( = KCTC 23109(T) = JCM 16723(T))。