Brennan Greg, Kozyrev Yury, Kodama Toshiaki, Hu Shiu-Lok
Department of Microbiology, University of Washington, Seattle, WA 98121, USA.
J Virol. 2007 Nov;81(22):12210-7. doi: 10.1128/JVI.02499-06. Epub 2007 Sep 5.
The TRIM5 family of proteins contains a RING domain, one or two B boxes, and a coiled-coil domain. The TRIM5alpha isoform also encodes a C-terminal B30.2(SPRY) domain, differences within which define the breadth and potency of TRIM5alpha-mediated retroviral restriction. Because Macaca nemestrina animals are susceptible to some human immunodeficiency virus (HIV) isolates, we sought to determine if differences exist in the TRIM5 gene and transcripts of these animals. We identified a two-nucleotide deletion (Delta2) in the transcript at the 5' terminus of exon 7 in all M. nemestrina TRIM5 cDNA clones examined. This frameshift results in a truncated protein of 300 amino acids lacking the B30.2(SPRY) domain, which we have named TRIM5theta. This deletion is likely due to a single nucleotide polymorphism that alters the 3' splice site between intron 6 and exon 7. In some clones, a deletion of the entire 27-nucleotide exon 7 (Deltaexon7) resulted in the restoration of the TRIM5 open reading frame and the generation of another novel isoform, TRIM5eta. There are 18 amino acid differences between M. nemestrina TRIM5eta and Macaca mulatta TRIM5alpha, some of which are at or near locations previously shown to affect the breadth and potency of TRIM5alpha-mediated restriction. Infectivity assays performed on permissive CrFK cells stably transduced with TRIM5eta or TRIM5theta show that these isoforms are incapable of restricting either HIV type 1 (HIV-1) or simian immunodeficiency virus infection. The expression of TRIM5 alleles incapable of restricting HIV-1 infection may contribute to the previously reported increased susceptibility of M. nemestrina to HIV-1 infection in vivo.
TRIM5蛋白家族包含一个RING结构域、一个或两个B盒以及一个卷曲螺旋结构域。TRIM5α亚型还编码一个C端B30.2(SPRY)结构域,该结构域内的差异决定了TRIM5α介导的逆转录病毒限制的广度和效力。由于豚尾猕猴对某些人类免疫缺陷病毒(HIV)分离株敏感,我们试图确定这些动物的TRIM5基因和转录本是否存在差异。我们在所有检测的豚尾猕猴TRIM5 cDNA克隆中,于外显子7的5'末端转录本中鉴定出一个两核苷酸缺失(Delta2)。这种移码导致产生一种300个氨基酸的截短蛋白,缺失B30.2(SPRY)结构域,我们将其命名为TRIM5θ。这种缺失可能是由于一个单核苷酸多态性改变了内含子6和外显子7之间的3'剪接位点。在一些克隆中,整个27核苷酸的外显子7缺失(Deltaexon7)导致TRIM5开放阅读框的恢复,并产生另一种新的亚型TRIM5η。豚尾猕猴TRIM5η与恒河猴TRIM5α之间有18个氨基酸差异,其中一些差异位于先前显示会影响TRIM5α介导的限制的广度和效力的位置或附近。在用TRIM5η或TRIM5θ稳定转导的允许性CrFK细胞上进行的感染性试验表明,这些亚型无法限制1型HIV(HIV-1)或猿猴免疫缺陷病毒感染。无法限制HIV-1感染的TRIM5等位基因的表达可能导致先前报道的豚尾猕猴在体内对HIV-1感染的易感性增加。