Cowen E W, Liu C-W, Steinberg S M, Kang S, Vonderheid E C, Kwak H S, Booher S, Petricoin E F, Liotta L A, Whiteley G, Hwang S T
Dermatology Branch, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD 20892, USA.
Br J Dermatol. 2007 Nov;157(5):946-53. doi: 10.1111/j.1365-2133.2007.08185.x. Epub 2007 Sep 13.
Serum proteomic analysis is an analytical technique utilizing high-throughput mass spectrometry (MS) in order to assay thousands of serum proteins simultaneously. The resultant 'proteomic signature' has been used to differentiate benign and malignant diseases, enable disease prognosis, and monitor response to therapy.
This pilot study was designed to determine if serum protein patterns could be used to distinguish patients with tumour-stage mycosis fungoides (MF) from patients with a benign inflammatory skin condition (psoriasis) and/or subjects with healthy skin.
Serum was analysed from 45 patients with tumour-stage MF, 56 patients with psoriasis, and 47 controls using two MS platforms of differing resolution. An artificial intelligence-based classification model was constructed to predict the presence of the disease state based on the serum proteomic signature.
Based on data from an independent testing set (14-16 subjects in each group), MF was distinguished from psoriasis with 78.6% (or 78.6%) sensitivity and 86.7% (or 93.8%) specificity, while sera from patients with psoriasis were distinguished from those of nonaffected controls with 86.7% (or 93.8%) sensitivity and 75.0% (or 76.9%) specificity (depending on the MS platform used). MF was distinguished from unaffected controls with 61.5% (or 71.4%) sensitivity and 91.7% (or 92.9%) specificity. In addition, a secondary survival analysis using 11 MS peaks identified significant survival differences between two MF groups (all P-values <0.05).
Serum proteomics should be further investigated for its potential to identify patients with neoplastic skin disease and its ability to determine disease prognosis.
血清蛋白质组分析是一种利用高通量质谱(MS)同时检测数千种血清蛋白的分析技术。所得的“蛋白质组特征”已被用于区分良性和恶性疾病、预测疾病预后以及监测治疗反应。
本初步研究旨在确定血清蛋白模式是否可用于区分肿瘤期蕈样肉芽肿(MF)患者与良性炎症性皮肤病(银屑病)患者和/或健康皮肤受试者。
使用两种分辨率不同的MS平台,对45例肿瘤期MF患者、56例银屑病患者和47例对照者的血清进行分析。构建了基于人工智能的分类模型,以根据血清蛋白质组特征预测疾病状态的存在。
基于独立测试集(每组14 - 16名受试者)的数据,MF与银屑病的区分灵敏度为78.6%(或78.6%),特异性为86.7%(或93.8%),而银屑病患者的血清与未受影响对照者的血清区分灵敏度为86.7%(或93.8%),特异性为75.0%(或76.9%)(取决于所使用的MS平台)。MF与未受影响对照者的区分灵敏度为61.5%(或71.4%),特异性为91.7%(或92.9%)。此外,使用11个MS峰进行的二次生存分析确定了两个MF组之间存在显著的生存差异(所有P值<0.05)。
血清蛋白质组学在识别皮肤肿瘤疾病患者及其确定疾病预后的能力方面的潜力应进一步研究。