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用于噬菌体治疗的最佳噬菌体突变率。

Optimal bacteriophage mutation rates for phage therapy.

作者信息

Kysela David T, Turner Paul E

机构信息

Department of Ecology and Evolutionary Biology, Yale University, P.O. Box 208106, New Haven, CT 06520-8106, USA.

出版信息

J Theor Biol. 2007 Dec 7;249(3):411-21. doi: 10.1016/j.jtbi.2007.08.007. Epub 2007 Aug 25.

Abstract

The mutability of bacteriophages offers a particular advantage in the treatment of bacterial infections not afforded by other antimicrobial therapies. When phage-resistant bacteria emerge, mutation may generate phage capable of exploiting and thus limiting population expansion among these emergent types. However, while mutation potentially generates beneficial variants, it also contributes to a genetic load of deleterious mutations. Here, we model the influence of varying phage mutation rate on the efficacy of phage therapy. All else being equal, phage types with historical mutation rates of approximately 0.1 deleterious mutations per genome per generation offer a reasonable balance between beneficial mutational diversity and deleterious mutational load. We determine that increasing phage inoculum density can undesirably increase the peak density of a mutant bacterial class by limiting the in situ production of mutant phage variants. For phage populations with minimal genetic load, engineering mutation rate increases beyond the mutation-selection balance optimum may provide even greater protection against emergent bacterial types, but only with very weak selective coefficients for de novo deleterious mutations (below approximately 0.01). Increases to the mutation rate beyond the optimal value at mutation-selection balance may therefore prove generally undesirable.

摘要

噬菌体的可突变性在治疗细菌感染方面具有独特优势,这是其他抗菌疗法所不具备的。当出现噬菌体抗性细菌时,突变可能产生能够利用这些新出现类型细菌并限制其种群扩张的噬菌体。然而,虽然突变有可能产生有益变体,但它也会导致有害突变的遗传负担。在此,我们模拟了噬菌体突变率变化对噬菌体治疗效果的影响。在其他条件相同的情况下,每代每个基因组产生约0.1个有害突变的历史突变率的噬菌体类型,在有益突变多样性和有害突变负担之间提供了合理的平衡。我们确定,增加噬菌体接种密度可能会通过限制突变噬菌体变体的原位产生,不合意地增加突变细菌类别的峰值密度。对于遗传负担最小的噬菌体群体,将突变率提高到超过突变 - 选择平衡最优值,可能会提供更强的针对新出现细菌类型的保护,但前提是对新生有害突变的选择系数非常小(低于约0.01)。因此,将突变率提高到超过突变 - 选择平衡的最优值通常可能是不可取的。

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