• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

基因组受轻微有害突变的污染:为何我们没有死上100回?

Contamination of the genome by very slightly deleterious mutations: why have we not died 100 times over?

作者信息

Kondrashov A S

机构信息

Section of Ecology and Systematics, Cornell University, Ithaca, NY 14853, USA.

出版信息

J Theor Biol. 1995 Aug 21;175(4):583-94. doi: 10.1006/jtbi.1995.0167.

DOI:10.1006/jtbi.1995.0167
PMID:7475094
Abstract

It is well known that when s, the selection coefficient against a deleterious mutation, is below approximately 1/4Ne, where Ne is the effective population size, the expected frequency of this mutation is approximately 0.5, if forward and backward mutation rates are similar. Thus, if the genome size, G, in nucleotides substantially exceeds the Ne of the whole species, there is a dangerous range of selection coefficients, 1/G < s < 1/4Ne. Mutations with s within this range are neutral enough to accumulate almost freely, but are still deleterious enough to make an impact at the level of the whole genome. In many vertebrates Ne approximately 10(4), while G approximately 10(9), so that the dangerous range includes more than four orders of magnitude. If substitutions at 10% of all nucleotide sites have selection coefficients within this range with the mean 10(-6), an average individual carries approximately 100 lethal equivalents. Some data suggest that a substantial fraction of nucleotides typical to a species may, indeed, be suboptimal. When selection acts on different mutations independently, this implies too high a mutation load. This paradox cannot be resolved by invoking beneficial mutations or environmental fluctuations. Several possible resolutions are considered, including soft selection and synergistic epistasis among very slightly deleterious mutations.

摘要

众所周知,当针对有害突变的选择系数s低于约1/4Ne(其中Ne是有效种群大小)时,如果正向和反向突变率相似,该突变的预期频率约为0.5。因此,如果以核苷酸计的基因组大小G大大超过整个物种的Ne,就存在一个危险的选择系数范围,即1/G < s < 1/4Ne。s在此范围内的突变足够中性,可以几乎自由地积累,但仍然有害到足以在整个基因组水平上产生影响。在许多脊椎动物中,Ne约为10^4,而G约为10^9,因此危险范围包括四个以上数量级。如果所有核苷酸位点的10%发生的替换其选择系数在此范围内,平均值为10^-6,那么一个平均个体携带约100个致死当量。一些数据表明,一个物种特有的相当一部分核苷酸可能确实并非最优。当选择独立作用于不同突变时,这意味着突变负荷过高。这个悖论无法通过引入有益突变或环境波动来解决。文中考虑了几种可能的解决方案,包括软选择和非常轻微有害突变之间的协同上位性。

相似文献

1
Contamination of the genome by very slightly deleterious mutations: why have we not died 100 times over?基因组受轻微有害突变的污染:为何我们没有死上100回?
J Theor Biol. 1995 Aug 21;175(4):583-94. doi: 10.1006/jtbi.1995.0167.
2
Selection in favor of nucleotides G and C diversifies evolution rates and levels of polymorphism at mammalian synonymous sites.对核苷酸G和C的选择使哺乳动物同义位点的进化速率和多态性水平多样化。
J Theor Biol. 2006 Jun 21;240(4):616-26. doi: 10.1016/j.jtbi.2005.10.020. Epub 2005 Dec 15.
3
Strength of the purifying selection against different categories of the point mutations in the coding regions of the human genome.人类基因组编码区针对不同类型点突变的净化选择强度。
Hum Mol Genet. 2006 Apr 1;15(7):1143-50. doi: 10.1093/hmg/ddl029. Epub 2006 Feb 24.
4
Functional constraints and frequency of deleterious mutations in noncoding DNA of rodents.啮齿动物非编码DNA中有害突变的功能限制与频率
Proc Natl Acad Sci U S A. 2003 Nov 11;100(23):13402-6. doi: 10.1073/pnas.2233252100. Epub 2003 Nov 3.
5
Risk of population extinction from fixation of deleterious and reverse mutations.有害突变和反向突变固定导致种群灭绝的风险。
Genetica. 1998;102-103(1-6):21-7.
6
Requisite mutational load, pathway epistasis and deterministic mutation accumulation in sexual versus asexual populations.有性与无性种群中的必需突变负荷、通路上位性和确定性突变积累
Genetica. 1998;102-103(1-6):71-81.
7
Survival of the steepest: hypersensitivity to mutations as an adaptation to soft selection.最陡峭者的生存:对突变的超敏反应作为对软选择的一种适应。
J Evol Biol. 2009 Apr;22(4):740-50. doi: 10.1111/j.1420-9101.2009.01697.x. Epub 2009 Feb 23.
8
Estimates of the genomic mutation rate for detrimental alleles in Drosophila melanogaster.黑腹果蝇中有害等位基因的基因组突变率估计值。
Genetics. 2004 Jun;167(2):815-26. doi: 10.1534/genetics.103.025262.
9
Optimal bacteriophage mutation rates for phage therapy.用于噬菌体治疗的最佳噬菌体突变率。
J Theor Biol. 2007 Dec 7;249(3):411-21. doi: 10.1016/j.jtbi.2007.08.007. Epub 2007 Aug 25.
10
Mutation and selection within the individual.个体内部的突变与选择。
Genetica. 1998;102-103(1-6):507-24.

引用本文的文献

1
Mutation-selection-drift balance models of complex diseases.复杂疾病的突变-选择-漂变平衡模型
bioRxiv. 2025 May 18:2025.05.18.654722. doi: 10.1101/2025.05.18.654722.
2
Constraints on the optimization of gene product diversity.基因产物多样性优化的限制因素。
Mol Syst Biol. 2025 May;21(5):472-491. doi: 10.1038/s44320-025-00095-4. Epub 2025 Apr 10.
3
An estimate of fitness reduction from mutation accumulation in a mammal allows assessment of the consequences of relaxed selection.估算哺乳动物因突变积累而导致的适应度降低,可以评估选择放松带来的后果。
PLoS Biol. 2024 Sep 26;22(9):e3002795. doi: 10.1371/journal.pbio.3002795. eCollection 2024 Sep.
4
Background Selection From Unlinked Sites Causes Nonindependent Evolution of Deleterious Mutations.背景选择导致非独立进化的有害突变从非连锁位点发生。
Genome Biol Evol. 2024 Mar 2;16(3). doi: 10.1093/gbe/evae050.
5
The fitness consequences of genetic divergence between polymorphic gene arrangements.遗传多态性基因排列之间的分歧对健康的影响。
Genetics. 2024 Mar 6;226(3). doi: 10.1093/genetics/iyad218.
6
Haplotype-based inference of recent effective population size in modern and ancient DNA samples.基于单体型的现代和古代 DNA 样本中近期有效种群大小的推断。
Nat Commun. 2023 Dec 1;14(1):7945. doi: 10.1038/s41467-023-43522-6.
7
Human deleterious mutation rate slows adaptation and implies high fitness variance.人类有害突变率减缓适应并意味着高适应性差异。
bioRxiv. 2025 Mar 25:2023.09.01.555871. doi: 10.1101/2023.09.01.555871.
8
Is there still evolution in the human population?人类群体中仍然存在进化吗?
Biol Futur. 2022 Dec;73(4):359-374. doi: 10.1007/s42977-022-00146-z. Epub 2023 Jan 2.
9
Accumulation and maintenance of information in evolution.信息在进化中的积累和保持。
Proc Natl Acad Sci U S A. 2022 Sep 6;119(36):e2123152119. doi: 10.1073/pnas.2123152119. Epub 2022 Aug 29.
10
Extreme purifying selection against point mutations in the human genome.人类基因组中针对点突变的极端净化选择。
Nat Commun. 2022 Jul 25;13(1):4312. doi: 10.1038/s41467-022-31872-6.