Gupta Malavika, Copeland Paul R
Department of Molecular Genetics, Microbiology and Immunology, University of Medicine and Dentistry of New Jersey-Robert Wood Johnson Medical School, Piscataway, New Jersey 08854, USA.
J Biol Chem. 2007 Dec 21;282(51):36797-807. doi: 10.1074/jbc.M707061200. Epub 2007 Oct 22.
A selenocysteine insertion sequence (SECIS) element in the 3'-untranslated region and an in-frame UGA codon are the requisite cis-acting elements for the incorporation of selenocysteine into selenoproteins. Equally important are the trans-acting factors SBP2, Sec-tRNA[Ser]Sec, and eEFSec. Multiple in-frame UGAs and two SECIS elements make the mRNA encoding selenoprotein P (Sel P) unique. To study the role of codon context in determining the efficiency of UGA readthrough at each of the 10 rat Sel P Sec codons, we individually cloned 27-nucleotide-long fragments representing each UGA codon context into a luciferase reporter construct harboring both Sel P SECIS elements. Significant differences, spanning an 8-fold range of UGA readthrough efficiency, were observed, but these differences were dramatically reduced in the presence of excess SBP2. Mutational analysis of the "fourth base" of contexts 1 and 5 revealed that only the latter followed the established rules for hierarchy of translation termination. In addition, mutations in either or both of the Sel P SECIS elements resulted in differential effects on UGA readthrough. Interestingly, even when both SECIS elements harbored a mutation of the core region required for Sec incorporation, context 5 retained a significantly higher level of readthrough than context 1. We also show that SBP2-dependent Sec incorporation is able to repress G418-induced UGA readthrough as well as eRF1-induced stimulation of termination. We conclude that a large codon context forms a cis-element that works together with Sec incorporation factors to determine readthrough efficiency.
3'-非翻译区中的硒代半胱氨酸插入序列(SECIS)元件和读码框内的UGA密码子是将硒代半胱氨酸掺入硒蛋白所需的顺式作用元件。同样重要的是反式作用因子SBP2、Sec-tRNA[Ser]Sec和eEFSec。多个读码框内的UGA和两个SECIS元件使得编码硒蛋白P(Sel P)的mRNA独具特色。为了研究密码子上下文在确定10个大鼠Sel P Sec密码子中每个密码子UGA通读效率方面的作用,我们将代表每个UGA密码子上下文的27个核苷酸长的片段分别克隆到一个携带两个Sel P SECIS元件的荧光素酶报告构建体中。观察到UGA通读效率存在显著差异,范围跨度达8倍,但在存在过量SBP2的情况下,这些差异显著减小。对上下文1和5的“第四个碱基”进行突变分析表明,只有后者遵循既定的翻译终止层次规则。此外,Sel P SECIS元件中的一个或两个发生突变会对UGA通读产生不同影响。有趣的是,即使两个SECIS元件都含有掺入Sec所需的核心区域突变,上下文5的通读水平仍显著高于上下文1。我们还表明,依赖SBP2的Sec掺入能够抑制G418诱导的UGA通读以及eRF1诱导的终止刺激。我们得出结论,大的密码子上下文形成一个顺式元件,它与Sec掺入因子共同作用来确定通读效率。