Alfonso-Sánchez M A, Pérez-Miranda A M, Herrera R J
Molecular Biology and Human Diversity Laboratory, Department of Biological Sciences, Florida International University, Miami, Florida 33199, USA.
Am J Hum Biol. 2008 Jan-Feb;20(1):91-9. doi: 10.1002/ajhb.20685.
The genomic diversity of the Arrernte people of Australia or caterpillar people was investigated utilizing 13 autosomal short tandem repeat (STR) markers. Significant departures from Hardy-Weinberg equilibrium were detected at the D18S51, TPOX and CSF1PO loci, which persisted after applying the Bonferroni correction. Gene diversity values oscillate between 0.6302 (CSF1PO) and 0.8731 (D21S11). Observed heterozygosity (Ho) ranges from 0.2632 (D18S51) to 0.8333 (vWA) and is lower than the expected heterozygosity (He) for 12 of the 13 loci analyzed. The genetic relationships of the Arrernte with Middle Eastern, East Asian, South Asian and Indian populations were analyzed by distance-based methods, including Neighbor-Joining trees and nonmetric multidimensional scaling. In addition, the genetic contribution of the populations included in the analysis to the Arrernte gene pool was estimated utilizing weighted least square coefficients. Although the Arrernte population exhibits a remarkable level of genetic differentiation, results of the phylogeographic analyses based on autosomal microsatellite data suggest a certain degree of genetic relatedness between the Arrernte tribe of Australia and populations from the Indian subcontinent. In contrast, the STR diversity analyses failed to detect substantial East Asian contribution to the genetic background of the Arrernte group.
利用13个常染色体短串联重复序列(STR)标记,对澳大利亚阿兰特人或毛虫人进行了基因组多样性研究。在D18S51、TPOX和CSF1PO位点检测到显著偏离哈迪-温伯格平衡的情况,在应用邦费罗尼校正后这种情况依然存在。基因多样性值在0.6302(CSF1PO)和0.8731(D21S11)之间波动。观察到的杂合度(Ho)范围为0.2632(D18S51)至0.8333(vWA),在所分析的13个位点中的12个位点,观察到的杂合度低于预期杂合度(He)。通过基于距离的方法,包括邻接法树和非度量多维标度分析,分析了阿兰特人与中东、东亚、南亚和印度人群的遗传关系。此外,利用加权最小二乘系数估计了分析中所纳入人群对阿兰特人基因库的遗传贡献。尽管阿兰特人群表现出显著的遗传分化水平,但基于常染色体微卫星数据的系统地理学分析结果表明,澳大利亚的阿兰特部落与印度次大陆人群之间存在一定程度的遗传相关性。相比之下,STR多样性分析未能检测到东亚人群对阿兰特人群遗传背景的实质性贡献。