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本文引用的文献

1
Spectroscopic characterization of heme iron-nitrosyl species and their role in NO reductase mechanisms in diiron proteins.血红素铁-亚硝酰基物种的光谱表征及其在双铁蛋白中一氧化氮还原酶机制中的作用。
Nat Prod Rep. 2007 Jun;24(3):610-20. doi: 10.1039/b604194a. Epub 2007 Mar 23.
2
Accommodation of NO in the active site of mammalian and bacterial cytochrome c oxidase aa3.一氧化氮在哺乳动物和细菌细胞色素c氧化酶aa3活性位点的容纳情况。
Biochim Biophys Acta. 2007 May;1767(5):387-92. doi: 10.1016/j.bbabio.2007.03.001. Epub 2007 Mar 12.
3
Characterization of a bimetallic-bridging intermediate in the reduction of NO to N2O: a density functional theory study.一氧化氮还原为一氧化二氮过程中双金属桥连中间体的表征:密度泛函理论研究
Inorg Chem. 2006 Apr 17;45(8):3187-90. doi: 10.1021/ic050991n.
4
Experimental and density functional theoretical investigations of linkage isomerism in six-coordinate FeNO(6) iron porphyrins with axial nitrosyl and nitro ligands.具有轴向亚硝酰基和硝基配体的六配位FeNO(6)铁卟啉中键合异构现象的实验与密度泛函理论研究
J Am Chem Soc. 2006 Feb 15;128(6):2093-104. doi: 10.1021/ja0567891.
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A theoretical study on nitric oxide reductase activity in a ba(3)-type heme-copper oxidase.Ba(3)型血红素铜氧化酶中一氧化氮还原酶活性的理论研究
Biochim Biophys Acta. 2006 Jan;1757(1):31-46. doi: 10.1016/j.bbabio.2005.11.004. Epub 2005 Dec 7.
6
Modeling side-on NO coordination to type 2 copper in nitrite reductase: structures, energetics, and bonding.亚硝酸还原酶中侧位一氧化氮与2型铜配位的建模:结构、能量学和键合
J Am Chem Soc. 2005 Nov 9;127(44):15384-5. doi: 10.1021/ja0559909.
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Detection of the His-heme Fe2+-NO species in the reduction of NO to N2O by ba3-oxidase from thermus thermophilus.嗜热栖热菌Ba3氧化酶将NO还原为N2O过程中His-血红素Fe2+-NO物种的检测。
J Am Chem Soc. 2005 Nov 2;127(43):15161-7. doi: 10.1021/ja0539490.
8
Atomic resolution structures of resting-state, substrate- and product-complexed Cu-nitrite reductase provide insight into catalytic mechanism.静止状态、底物和产物复合的亚硝酸铜还原酶的原子分辨率结构为催化机制提供了见解。
Proc Natl Acad Sci U S A. 2005 Aug 23;102(34):12041-6. doi: 10.1073/pnas.0504207102. Epub 2005 Aug 10.
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A homologous expression system for obtaining engineered cytochrome ba3 from Thermus thermophilus HB8.一种用于从嗜热栖热菌HB8中获得工程化细胞色素ba3的同源表达系统。
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A novel cryoprotection scheme for enhancing the diffraction of crystals of recombinant cytochrome ba3 oxidase from Thermus thermophilus.一种用于增强嗜热栖热菌重组细胞色素ba3氧化酶晶体衍射的新型冷冻保护方案。
Acta Crystallogr D Biol Crystallogr. 2005 Mar;61(Pt 3):340-3. doi: 10.1107/S0907444904033906. Epub 2005 Feb 24.

嗜热栖热菌细胞色素ba3中CuB-亚硝酰基复合物的傅里叶变换红外光谱表征:与血红素-铜末端氧化酶中NO还原酶活性的相关性

Fourier transform infrared characterization of a CuB-nitrosyl complex in cytochrome ba3 from Thermus thermophilus: relevance to NO reductase activity in heme-copper terminal oxidases.

作者信息

Hayashi Takahiro, Lin I-Jin, Chen Ying, Fee James A, Moënne-Loccoz Pierre

机构信息

Department of Molecular Biology, The Scripps Research Institute, La Jolla, California 92037, USA.

出版信息

J Am Chem Soc. 2007 Dec 5;129(48):14952-8. doi: 10.1021/ja074600a. Epub 2007 Nov 13.

DOI:10.1021/ja074600a
PMID:17997553
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2548420/
Abstract

The two heme-copper terminal oxidases of Thermus thermophilus have been shown to catalyze the two-electron reduction of nitric oxide (NO) to nitrous oxide (N2O) [Giuffre, A.; Stubauer, G.; Sarti, P.; Brunori, M.; Zumft, W. G.; Buse, G.; Soulimane, T. Proc. Natl. Acad. Sci. U.S.A. 1999, 96, 14718-14723]. While it is well-established that NO binds to the reduced heme a3 to form a low-spin heme {FeNO}7 species, the role CuB plays in the binding of the second NO remains unclear. Here we present low-temperature FTIR photolysis experiments carried out on the NO complex formed by addition of NO to fully reduced cytochrome ba3. Low-temperature UV-vis, EPR, and RR spectroscopies confirm the binding of NO to the heme a3 and the efficiency of the photolysis at 30 K. The nu(NO) modes from the light-induced FTIR difference spectra are isolated from other perturbed vibrations using 15NO and 15N18O. The nu(N-O)a3 is observed at 1622 cm-1, and upon photolysis, it is replaced by a new nu(N-O) at 1589 cm-1 assigned to a CuB-nitrosyl complex. This N-O stretching frequency is more than 100 cm-1 lower than those reported for Cu-NO models with three N-ligands and for CuB+-NO in bovine aa3. Because the UV-vis and RR data do not support a bridging configuration between CuB and heme a3 for the photolyzed NO, we assign the exceptionally low nu(NO) to an O-bound (eta1-O) or a side-on (eta2-NO) CuB-nitrosyl complex. From this study, we propose that, after binding of a first NO molecule to the heme a3 of fully reduced Tt ba3, the formation of an N-bound {CuNO}11 is prevented, and the addition of a second NO produces an O-bond CuB-hyponitrite species bridging CuB and Fea3. In contrast, bovine cytochrome c oxidase is believed to form an N-bound CuB-NO species; the [{FeNO}7{CuNO}11] complex is suggested here to be an inhibitory complex.

摘要

嗜热栖热菌的两种血红素-铜末端氧化酶已被证明可催化一氧化氮(NO)双电子还原为一氧化二氮(N₂O)[朱弗雷,A.;斯图鲍尔,G.;萨尔蒂,P.;布鲁诺里,M.;祖姆夫特,W. G.;布斯,G.;苏利马内,T.《美国国家科学院院刊》1999年,96卷,14718 - 14723页]。虽然NO与还原态的血红素a₃结合形成低自旋血红素{FeNO}₇物种这一点已得到充分证实,但CuB在第二个NO结合过程中所起的作用仍不清楚。在此,我们展示了对通过向完全还原的细胞色素ba₃中添加NO形成的NO复合物进行的低温傅里叶变换红外光解实验。低温紫外可见光谱、电子顺磁共振光谱和拉曼光谱证实了NO与血红素a₃的结合以及在30K下光解的效率。利用¹⁵NO和¹⁵N¹⁸O从光诱导傅里叶变换红外差谱中分离出了来自NO的ν(NO)模式与其他受扰振动。ν(N - O)a₃在1622 cm⁻¹处被观测到,光解后,它被一个位于1589 cm⁻¹处的新的ν(N - O)所取代,该新的ν(N - O)被归属于一个CuB - 亚硝酰复合物。这个N - O伸缩频率比具有三个N配体的Cu - NO模型以及牛aa₃中的CuB⁺ - NO所报道的频率低100 cm⁻¹以上。由于紫外可见光谱和拉曼光谱数据不支持光解后的NO在CuB和血红素a₃之间形成桥连构型,我们将异常低的ν(NO)归属于一个O结合(η¹ - O)或侧接(η² - NO)的CuB - 亚硝酰复合物。通过这项研究,我们提出,在第一个NO分子与完全还原的嗜热栖热菌ba₃的血红素a₃结合后,可防止形成N结合的{CuNO}₁₁,并且添加第二个NO会产生一个桥连CuB和Fea₃的O键合CuB - 连二次硝酸根物种。相比之下,牛细胞色素c氧化酶被认为会形成一个N结合的CuB - NO物种;这里提出的[{FeNO}₇{CuNO}₁₁]复合物被认为是一个抑制性复合物。