Deng Qiongying, Xu Lin, Gong Jichun, Zhou Lining, Li Songfeng, Deng Xiangfa, Luo Guorong, Xie Xiaoxun
Department of Anatomy, Guangxi Medical University, Nanning 530021, China. yingzideng@sinacom
J Genet Genomics. 2007 Dec;34(12):1072-9. doi: 10.1016/S1673-8527(07)60122-2.
The aim of this study is to investigate the genetic diversity in 15 STRs (short tandem repeats) loci of four minorities in Guangxi Province and to probe into the genetic variation and relationships among these ethnic groups. Allele frequencies of 15 STR loci were collected from 766 unrelated Mulao, Maonan, Miao, and Yao ethnic individuals by PCR-STR and sequencing, and their allele-frequency distribution were compared with each other. The genetic parameters and genetic distances were calculated, and the phylogenetic tree was constructed. Based on the results from this study, 135, 134, 148, and 145 alleles and 424, 432, 445, and 436 genotypes for 15 STR loci were observed in the Mulao, Maonan, Miao, and Yao minorities, respectively. The average heterozygosity of all ethnic groups analyzed was above 0.7; the cumulative power of discrimination (DP), the probabilities of paternity exclusion (EPP), and the polymorphic information content (PIC) were greater than 0.99999. Comparison of the allele-frequency distribution indicated that there were significant differences at most loci between Maonan vs. Miao, Yao vs. other groups, but no distinct differences between Mulao vs. Maonan, and Mulao vs. Miao minorities. The NJ tree based on the genetic distance showed that the four minorities were separated into two groups. Mulao and Maonan were clustered into one group, whereas Miao and Yao into the other. Our results revealed that 15 STR loci of the four minorities possessed high genetic diversities. Therefore, the combination of these 15 STRs is a powerful tool for forensic individual identification and paternity investigation, as well as anthropologic and genetic researches. The genetic variation and relationships among the 4 populations revealed by 15 STRs are basically consistent with their linguistic culture and ethical history.
本研究旨在调查广西四个少数民族15个短串联重复序列(STR)位点的遗传多样性,探讨这些民族之间的遗传变异及亲缘关系。采用PCR-STR和测序技术,从766名无血缘关系的仫佬族、毛南族、苗族和瑶族个体中收集15个STR位点的等位基因频率,并比较它们的等位基因频率分布。计算遗传参数和遗传距离,构建系统发育树。根据本研究结果,在仫佬族、毛南族、苗族和瑶族中分别观察到15个STR位点的135、134、148和145个等位基因以及424、432、445和436种基因型。所有分析民族的平均杂合度均高于0.7;累积鉴别力(DP)、排除父权概率(EPP)和多态信息含量(PIC)均大于0.99999。等位基因频率分布比较表明,毛南族与苗族、瑶族与其他群体在大多数位点存在显著差异,但仫佬族与毛南族、仫佬族与苗族之间无明显差异。基于遗传距离构建的NJ树显示,这四个少数民族分为两组。仫佬族和毛南族聚为一组,苗族和瑶族聚为另一组。我们的结果表明,这四个少数民族的15个STR位点具有高度的遗传多样性。因此,这15个STR的组合是法医个体识别和亲子鉴定以及人类学和遗传学研究的有力工具。15个STR揭示的4个群体之间的遗传变异和亲缘关系基本与其语言文化和民族历史一致。