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利用 InDel 标记对甘肃裕固族和贵州苗族群体进行遗传分布分析和群体背景探索。

Genetic distribution analyses and population background explorations of Gansu Yugur and Guizhou Miao groups via InDel markers.

机构信息

Key laboratory of Shaanxi Province for Craniofacial Precision Medicine Research, College of Stomatology, Xi'an Jiaotong University, 710004, Xi'an, China.

Clinical Research Center of Shaanxi Province for Dental and Maxillofacial Diseases, College of Stomatology, Xi'an Jiaotong University, 710004, Xi'an, China.

出版信息

J Hum Genet. 2019 Jun;64(6):535-543. doi: 10.1038/s10038-019-0595-3. Epub 2019 Apr 3.

Abstract

Insertion and deletion markers (InDels) have gained considerable attentions in population genetics and forensic research. In this study, we investigated genetic distributions of 30 InDels in Gansu Yugur and Guizhou Miao groups and evaluated their forensic application values. Genetic relationship analyses between Gansu Yugur, Guizhou Miao groups and other published populations were conducted based on these 30 InDels. Power of discrimination and power of exclusion in trio and duo cases of 30 InDels ranged from 0.3528 to 0.6247, 0.0937 to 0.1873, and 0.0219 to 0.1247 in Gansu Yugur group; and they ranged from 0.2579 to 0.6247, 0.0671 to 0.1874, and 0.0105 to 0.1247 in Guizhou Miao group. Obtained cumulative power of discrimination values indicated these InDels could be used for forensic individual identifications in both ethnic groups. Principal component analysis and phylogenetic reconstruction revealed that Gansu Yugur and Guizhou Miao groups had close affinities with their neighboring populations. Genetic structure analyses among these populations also indicated that studied Gansu Yugur and Guizhou Miao groups showed similar genetic structure with their neighboring populations. Further analyses of Y-STR, mtDNA, and ancestry informative markers should be conducted to better understand genetic backgrounds of Gansu Yugur and Guizhou Miao groups in the future.

摘要

插入缺失标记(InDels)在群体遗传学和法医学研究中受到了广泛关注。本研究调查了甘肃裕固族和贵州苗族群体中 30 个 InDels 的遗传分布,并评估了它们在法医学中的应用价值。基于这 30 个 InDels,我们对甘肃裕固族、贵州苗族群体与其他已发表群体进行了遗传关系分析。在甘肃裕固族群体中,30 个 InDels 在三人和二人亲子案例中的判别能力和排除能力分别为 0.3528 至 0.6247、0.0937 至 0.1873 和 0.0219 至 0.1247;在贵州苗族群体中,它们分别为 0.2579 至 0.6247、0.0671 至 0.1874 和 0.0105 至 0.1247。获得的累积判别能力值表明,这些 InDels 可用于两个民族的法医学个体识别。主成分分析和系统发育重建显示,甘肃裕固族和贵州苗族群体与邻近群体具有密切的亲缘关系。这些群体的遗传结构分析也表明,所研究的甘肃裕固族和贵州苗族群体与邻近群体具有相似的遗传结构。未来应进一步分析 Y-STR、mtDNA 和祖先信息标记,以更好地了解甘肃裕固族和贵州苗族群体的遗传背景。

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