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白质纤维束聚类与定量分析的统一框架。

A unified framework for clustering and quantitative analysis of white matter fiber tracts.

作者信息

Maddah Mahnaz, Grimson W Eric L, Warfield Simon K, Wells William M

机构信息

Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, 32 Vassar Street, Cambridge, USA.

出版信息

Med Image Anal. 2008 Apr;12(2):191-202. doi: 10.1016/j.media.2007.10.003. Epub 2007 Oct 25.

Abstract

We present a novel approach for joint clustering and point-by-point mapping of white matter fiber pathways. Knowledge of the point correspondence along the fiber pathways is not only necessary for accurate clustering of the trajectories into fiber bundles, but also crucial for any tract-oriented quantitative analysis. We employ an expectation-maximization (EM) algorithm to cluster the trajectories in a gamma mixture model context. The result of clustering is the probabilistic assignment of the fiber trajectories to each cluster, an estimate of the cluster parameters, i.e. spatial mean and variance, and point correspondences. The fiber bundles are modeled by the mean trajectory and its spatial variation. Point-by-point correspondence of the trajectories within a bundle is obtained by constructing a distance map and a label map from each cluster center at every iteration of the EM algorithm. This offers a time-efficient alternative to pairwise curve matching of all trajectories with respect to each cluster center. The proposed method has the potential to benefit from an anatomical atlas of fiber tracts by incorporating it as prior information in the EM algorithm. The algorithm is also capable of handling outliers in a principled way. The presented results confirm the efficiency and effectiveness of the proposed framework for quantitative analysis of diffusion tensor MRI.

摘要

我们提出了一种用于白质纤维束联合聚类和逐点映射的新方法。沿纤维束的点对应关系知识不仅对于将轨迹准确聚类为纤维束是必要的,而且对于任何面向束的定量分析也至关重要。我们采用期望最大化(EM)算法在伽马混合模型的背景下对轨迹进行聚类。聚类的结果是纤维轨迹到每个聚类的概率分配、聚类参数的估计,即空间均值和方差,以及点对应关系。纤维束由平均轨迹及其空间变化建模。在EM算法的每次迭代中,通过从每个聚类中心构建距离图和标签图来获得束内轨迹的逐点对应关系。这为相对于每个聚类中心的所有轨迹的成对曲线匹配提供了一种高效的替代方法。所提出的方法有可能通过将纤维束解剖图谱作为先验信息纳入EM算法中而受益。该算法还能够以一种有原则的方式处理异常值。给出的结果证实了所提出框架在扩散张量MRI定量分析中的效率和有效性。

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本文引用的文献

1
Clustering Fiber Traces Using Normalized Cuts.使用归一化割算法对纤维轨迹进行聚类
Med Image Comput Comput Assist Interv. 2004 Sep 2;3216/2004(3216):368-375. doi: 10.1007/b100265.
2
Analysis of brain white matter via fiber tract modeling.通过纤维束建模分析脑白质。
Conf Proc IEEE Eng Med Biol Soc. 2004;2004:4421-4. doi: 10.1109/IEMBS.2004.1404229.
5
Automated atlas-based clustering of white matter fiber tracts from DTMRI.基于图谱自动聚类DTMRI白质纤维束
Med Image Comput Comput Assist Interv. 2005;8(Pt 1):188-95. doi: 10.1007/11566465_24.
9
Quantification of the shape of fiber tracts.纤维束形状的量化
Magn Reson Med. 2006 Apr;55(4):894-903. doi: 10.1002/mrm.20858.

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