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Ancora:一个用于探索高度保守非编码元件及其与发育调控基因关联的网络资源。

Ancora: a web resource for exploring highly conserved noncoding elements and their association with developmental regulatory genes.

作者信息

Engström Pär G, Fredman David, Lenhard Boris

机构信息

Computational Biology Unit, Bergen Center for Computational Science, University of Bergen, Thormøhlensgate, N-5008 Bergen, Norway.

出版信息

Genome Biol. 2008;9(2):R34. doi: 10.1186/gb-2008-9-2-r34. Epub 2008 Feb 15.

DOI:10.1186/gb-2008-9-2-r34
PMID:18279518
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2374709/
Abstract

Metazoan genomes contain arrays of highly conserved noncoding elements (HCNEs) that span developmental regulatory genes and define regulatory domains. We describe Ancora http://ancora.genereg.net, a web resource that provides data and tools for exploring genomic organization of HCNEs for multiple genomes. Ancora includes a genome browser that shows HCNE locations and features novel HCNE density plots as a powerful tool to discover developmental regulatory genes and distinguish their regulatory elements and domains.

摘要

后生动物基因组包含一系列高度保守的非编码元件(HCNEs),这些元件跨越发育调控基因并定义调控域。我们介绍了Ancora(http://ancora.genereg.net),这是一个网络资源,提供用于探索多个基因组中HCNEs基因组组织的数据和工具。Ancora包括一个基因组浏览器,它显示HCNE的位置,并展示新颖的HCNE密度图,作为发现发育调控基因并区分其调控元件和结构域的强大工具。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6610/2374709/78e9fc8993f7/gb-2008-9-2-r34-7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6610/2374709/33f7c02e5655/gb-2008-9-2-r34-1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6610/2374709/a09063df0022/gb-2008-9-2-r34-2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6610/2374709/5801e7dd5679/gb-2008-9-2-r34-3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6610/2374709/2116364c5e5b/gb-2008-9-2-r34-4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6610/2374709/94421765cfea/gb-2008-9-2-r34-5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6610/2374709/d77bf04973b3/gb-2008-9-2-r34-6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6610/2374709/78e9fc8993f7/gb-2008-9-2-r34-7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6610/2374709/33f7c02e5655/gb-2008-9-2-r34-1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6610/2374709/a09063df0022/gb-2008-9-2-r34-2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6610/2374709/5801e7dd5679/gb-2008-9-2-r34-3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6610/2374709/2116364c5e5b/gb-2008-9-2-r34-4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6610/2374709/94421765cfea/gb-2008-9-2-r34-5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6610/2374709/d77bf04973b3/gb-2008-9-2-r34-6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6610/2374709/78e9fc8993f7/gb-2008-9-2-r34-7.jpg

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