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基因敲减表明U5小核核糖核蛋白颗粒(U5 snRNP)在体外剪接体组装过程中发挥后期作用。

Genetic depletion indicates a late role for U5 snRNP during in vitro spliceosome assembly.

作者信息

Séraphin B, Abovich N, Rosbash M

机构信息

Howard Hughes Medical Institute, Department of Biology, Brandeis University, Waltham, MA 02254.

出版信息

Nucleic Acids Res. 1991 Jul 25;19(14):3857-60. doi: 10.1093/nar/19.14.3857.

DOI:10.1093/nar/19.14.3857
PMID:1830649
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC328474/
Abstract

The pre-mRNA splicing pathway is highly conserved from yeast (S. cerevisiae) to mammals. Of the four snRNPs involved in splicing three (U1, U2 and U4/U6) have been shown to be essential for in vitro splicing. To examine the remaining snRNP, we utilized our previously described genetic procedures (Seraphin and Rosbash, 1989) to prepare yeast extracts depleted of U5 snRNP. The results show that U5 snRNP is necessary for both steps of pre- mRNA splicing and for proper spliceosome assembly, i.e., addition of the U4/U5/U6 triple snRNP. The prior steps of U1 and U2 snRNP addition occur normally in the absence of U5 snRNP.

摘要

从前体mRNA剪接途径从酵母(酿酒酵母)到哺乳动物都高度保守。在参与剪接的四种小核核糖核蛋白颗粒(snRNP)中,已证明其中三种(U1、U2和U4/U6)对于体外剪接至关重要。为了研究剩余的snRNP,我们利用之前描述的遗传方法(Seraphin和Rosbash,1989年)制备了缺乏U5 snRNP的酵母提取物。结果表明,U5 snRNP对于前体mRNA剪接的两个步骤以及正确的剪接体组装(即添加U4/U5/U6三小核核糖核蛋白颗粒)都是必需的。在没有U5 snRNP的情况下,添加U1和U2 snRNP的先前步骤正常发生。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/00f4/328474/cfac3fb62ef0/nar00094-0074-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/00f4/328474/7557956dc120/nar00094-0073-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/00f4/328474/bf4021c2b238/nar00094-0073-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/00f4/328474/3974ff41ec02/nar00094-0074-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/00f4/328474/cfac3fb62ef0/nar00094-0074-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/00f4/328474/7557956dc120/nar00094-0073-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/00f4/328474/bf4021c2b238/nar00094-0073-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/00f4/328474/3974ff41ec02/nar00094-0074-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/00f4/328474/cfac3fb62ef0/nar00094-0074-b.jpg

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本文引用的文献

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The 5' terminus of the RNA moiety of U1 small nuclear ribonucleoprotein particles is required for the splicing of messenger RNA precursors.U1小核核糖核蛋白颗粒的RNA部分的5'末端是信使RNA前体剪接所必需的。
Cell. 1984 Aug;38(1):299-307. doi: 10.1016/0092-8674(84)90551-8.
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Affinity chromatography of splicing complexes: U2, U5, and U4 + U6 small nuclear ribonucleoprotein particles in the spliceosome.剪接复合体的亲和层析:剪接体中的U2、U5以及U4 + U6小核核糖核蛋白颗粒
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An essential yeast snRNA with a U5-like domain is required for splicing in vivo.
Sm 复合物是 exosome 加工非编码 RNA 所必需的。
PLoS One. 2013 Jun 6;8(6):e65606. doi: 10.1371/journal.pone.0065606. Print 2013.
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Arrested yeast splicing complexes indicate stepwise snRNP recruitment during in vivo spliceosome assembly.停滞的酵母剪接复合体表明体内剪接体组装过程中snRNP的逐步招募。
RNA. 2006 Jun;12(6):968-79. doi: 10.1261/rna.50506. Epub 2006 Apr 17.
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6
Formation of mRNA 3' ends in eukaryotes: mechanism, regulation, and interrelationships with other steps in mRNA synthesis.真核生物中mRNA 3'末端的形成:机制、调控及其与mRNA合成其他步骤的相互关系
Microbiol Mol Biol Rev. 1999 Jun;63(2):405-45. doi: 10.1128/MMBR.63.2.405-445.1999.
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Depletion of yeast RNase III blocks correct U2 3' end formation and results in polyadenylated but functional U2 snRNA.酵母核糖核酸酶III的缺失会阻碍U2 3'端的正确形成,并导致多聚腺苷酸化但功能正常的U2小核核糖核酸。
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Progression through the spliceosome cycle requires Prp38p function for U4/U6 snRNA dissociation.通过剪接体循环的进程需要Prp38p的功能来实现U4/U6 snRNA解离。
EMBO J. 1998 May 15;17(10):2938-46. doi: 10.1093/emboj/17.10.2938.
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Construction of an in vivo-regulated U6 snRNA transcription unit as a tool to study U6 function.构建体内调控的U6小核RNA转录单元作为研究U6功能的工具。
RNA. 1998 Feb;4(2):231-8.
10
Functional analysis of the U5 snRNA loop 1 in the second catalytic step of yeast pre-mRNA splicing.酵母前体mRNA剪接第二步反应中U5小核仁RNA环1的功能分析
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Electrophoresis of ribonucleoproteins reveals an ordered assembly pathway of yeast splicing complexes.核糖核蛋白的电泳揭示了酵母剪接复合体的有序组装途径。
Nature. 1986;324(6095):341-5. doi: 10.1038/324341a0.
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Specific small nuclear RNAs are associated with yeast spliceosomes.特定的小核RNA与酵母剪接体相关。
Cell. 1986 Jun 20;45(6):869-77. doi: 10.1016/0092-8674(86)90561-1.
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Early commitment of yeast pre-mRNA to the spliceosome pathway.酵母前体mRNA对剪接体途径的早期定向
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A U1 snRNA:pre-mRNA base pairing interaction is required early in yeast spliceosome assembly but does not uniquely define the 5' cleavage site.U1小核核糖核酸:前体信使核糖核酸碱基配对相互作用在酵母剪接体组装早期是必需的,但并非唯一决定5' 切割位点。
EMBO J. 1988 Aug;7(8):2533-8. doi: 10.1002/j.1460-2075.1988.tb03101.x.
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U2 as well as U1 small nuclear ribonucleoproteins are involved in premessenger RNA splicing.U2以及U1小核核糖核蛋白参与信使前体RNA剪接。
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Multiple factors including the small nuclear ribonucleoproteins U1 and U2 are necessary for pre-mRNA splicing in vitro.包括小核核糖核蛋白U1和U2在内的多种因素是体外前体mRNA剪接所必需的。
Cell. 1985 Oct;42(3):725-36. doi: 10.1016/0092-8674(85)90269-7.
10
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