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大肠杆菌的SOS诱导型DNA修复蛋白RuvA和RuvB:RuvA与RuvB在ATP水解及超螺旋DNA中十字形结构复性方面的功能相互作用。

SOS-inducible DNA repair proteins, RuvA and RuvB, of Escherichia coli: functional interactions between RuvA and RuvB for ATP hydrolysis and renaturation of the cruciform structure in supercoiled DNA.

作者信息

Shiba T, Iwasaki H, Nakata A, Shinagawa H

机构信息

Department of Experimental Chemotherapy, Osaka University, Japan.

出版信息

Proc Natl Acad Sci U S A. 1991 Oct 1;88(19):8445-9. doi: 10.1073/pnas.88.19.8445.

DOI:10.1073/pnas.88.19.8445
PMID:1833759
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC52525/
Abstract

The ruv operon is induced by treatments that damage DNA and is regulated by the LexA repressor. It encodes two proteins, RuvA and RuvB, that are involved in DNA repair, recombination in RecE and RecF pathways, and mutagenesis. RuvB protein was previously purified and has ATP-binding activity and weak ATPase activity. To study the biochemical properties of RuvA and its interaction with RuvB, we purified RuvA protein to near homogeneity from an over-producing strain. RuvA bound more efficiently to single-stranded DNA than to double-stranded DNA. RuvA bound to DNA greatly enhanced the ATPase activity of RuvB; the enhancing effect of various forms of DNA was in the order of supercoiled DNA greater than single-stranded DNA greater than linear double-stranded DNA. UV irradiation further enhanced the ATPase stimulatory effect of supercoiled DNA dose dependently. The RuvA-RuvB complex has an activity that renatures the cruciform structure in supercoiled DNA. From these experiments and previous work, we infer that the RuvA-RuvB complex may promote branch migration in recombination and may correct irregular structures in DNA, such as cruciforms and hairpins, to facilitate DNA repair using ATP as the energy source.

摘要

ruv操纵子可被损伤DNA的处理诱导,并受LexA阻遏物调控。它编码两种蛋白质,RuvA和RuvB,它们参与DNA修复、RecE和RecF途径中的重组以及诱变。RuvB蛋白先前已被纯化,具有ATP结合活性和较弱的ATP酶活性。为了研究RuvA的生化特性及其与RuvB的相互作用,我们从一个过量表达菌株中纯化了近乎纯一的RuvA蛋白。RuvA与单链DNA的结合比与双链DNA的结合更有效。RuvA与DNA的结合极大地增强了RuvB的ATP酶活性;各种形式的DNA的增强作用顺序为超螺旋DNA大于单链DNA大于线性双链DNA。紫外线照射剂量依赖性地进一步增强了超螺旋DNA的ATP酶刺激作用。RuvA-RuvB复合物具有使超螺旋DNA中的十字形结构复性的活性。从这些实验和先前的工作中,我们推断RuvA-RuvB复合物可能促进重组中的分支迁移,并可能纠正DNA中的不规则结构,如十字形和发夹结构,以利用ATP作为能量来源促进DNA修复。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bbbf/52525/bbc3a69020e7/pnas01069-0177-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bbbf/52525/1b4984603995/pnas01069-0175-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bbbf/52525/db7aee92fe71/pnas01069-0176-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bbbf/52525/ae60c40bc4e1/pnas01069-0176-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bbbf/52525/2d7490e4b7ee/pnas01069-0176-c.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bbbf/52525/66eb2d5d0c42/pnas01069-0176-d.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bbbf/52525/bbc3a69020e7/pnas01069-0177-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bbbf/52525/1b4984603995/pnas01069-0175-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bbbf/52525/db7aee92fe71/pnas01069-0176-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bbbf/52525/ae60c40bc4e1/pnas01069-0176-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bbbf/52525/2d7490e4b7ee/pnas01069-0176-c.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bbbf/52525/66eb2d5d0c42/pnas01069-0176-d.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bbbf/52525/bbc3a69020e7/pnas01069-0177-a.jpg

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本文引用的文献

1
Damage to DNA induces expression of the ruv gene of Escherichia coli.DNA损伤会诱导大肠杆菌ruv基因的表达。
Mol Gen Genet. 1982;185(2):352-5. doi: 10.1007/BF00330811.
2
recA protein-promoted DNA strand exchange. Stable complexes of recA protein and single-stranded DNA formed in the presence of ATP and single-stranded DNA binding protein.RecA蛋白促进的DNA链交换。在ATP和单链DNA结合蛋白存在的情况下形成的RecA蛋白与单链DNA的稳定复合物。
J Biol Chem. 1982 Jul 25;257(14):8523-32.
3
Binding of the recA protein of Escherichia coli to single- and double-stranded DNA.
比较兔实验感染和体外培养梅毒螺旋体的转录谱:高度相似,但又有所不同。
PLoS Pathog. 2021 Sep 27;17(9):e1009949. doi: 10.1371/journal.ppat.1009949. eCollection 2021 Sep.
4
Thermal proteome profiling in bacteria: probing protein state .细菌的热蛋白质组分析:探测蛋白质状态
Mol Syst Biol. 2018 Jul 6;14(7):e8242. doi: 10.15252/msb.20188242.
5
The helicase DinG responds to stress due to DNA double strand breaks.解旋酶DinG对由于DNA双链断裂而产生的应激作出反应。
PLoS One. 2017 Nov 9;12(11):e0187900. doi: 10.1371/journal.pone.0187900. eCollection 2017.
6
Transcription factors and genetic circuits orchestrating the complex, multilayered response of Clostridium acetobutylicum to butanol and butyrate stress.转录因子和基因回路调控丙酮丁醇梭菌对丁醇和丁酸盐胁迫的复杂多层反应。
BMC Syst Biol. 2013 Nov 6;7:120. doi: 10.1186/1752-0509-7-120.
7
Plasmodium falciparum RuvB proteins: Emerging importance and expectations beyond cell cycle progression.恶性疟原虫RuvB蛋白:超越细胞周期进程的新重要性及期望
Commun Integr Biol. 2012 Jul 1;5(4):350-61. doi: 10.4161/cib.20005.
8
Microbial antigenic variation mediated by homologous DNA recombination.微生物通过同源 DNA 重组介导的抗原变异。
FEMS Microbiol Rev. 2012 Sep;36(5):917-48. doi: 10.1111/j.1574-6976.2011.00321.x. Epub 2012 Jan 17.
9
Functional analysis of DNA replication fork reversal catalyzed by Mycobacterium tuberculosis RuvAB proteins.结核分枝杆菌 RuvAB 蛋白催化的 DNA 复制叉倒转的功能分析。
J Biol Chem. 2012 Jan 6;287(2):1345-60. doi: 10.1074/jbc.M111.304741. Epub 2011 Nov 17.
10
Functional characterization of the RuvB homologs from Mycoplasma pneumoniae and Mycoplasma genitalium.肺炎支原体和生殖支原体 RuvB 同源物的功能特征。
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大肠杆菌RecA蛋白与单链和双链DNA的结合。
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4
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5
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6
Mutagenesis and inducible responses to deoxyribonucleic acid damage in Escherichia coli.大肠杆菌中的诱变作用及对脱氧核糖核酸损伤的诱导反应
Microbiol Rev. 1984 Mar;48(1):60-93. doi: 10.1128/mr.48.1.60-93.1984.
7
The pUC plasmids, an M13mp7-derived system for insertion mutagenesis and sequencing with synthetic universal primers.pUC质粒,一种源自M13mp7的用于插入诱变和使用合成通用引物进行测序的系统。
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8
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9
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J Bacteriol. 1974 Feb;117(2):337-44. doi: 10.1128/jb.117.2.337-344.1974.
10
Protein complexes formed during the incision reaction catalyzed by the Escherichia coli UvrABC endonuclease.由大肠杆菌UvrABC核酸内切酶催化的切割反应过程中形成的蛋白质复合物。
Nucleic Acids Res. 1986 Mar 25;14(6):2567-82. doi: 10.1093/nar/14.6.2567.