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2
Methylation patterns of histone H3 Lys 4, Lys 9 and Lys 27 in transcriptionally active and inactive Arabidopsis genes and in atx1 mutants.拟南芥转录活跃和不活跃基因以及atx1突变体中组蛋白H3赖氨酸4、赖氨酸9和赖氨酸27的甲基化模式。
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The Arabidopsis homologs of trithorax (ATX1) and enhancer of zeste (CLF) establish 'bivalent chromatin marks' at the silent AGAMOUS locus.拟南芥中三体胸苷(ATX1)和增强子(CLF)的同源物在沉默的AGAMOUS基因座上建立了“双价染色质标记”。
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本文引用的文献

1
Phosphoinositide 5-phosphate and phosphoinositide 4-phosphate trigger distinct specific responses of Arabidopsis genes: genome-wide expression analyses.磷酸肌醇 5-磷酸和磷酸肌醇 4-磷酸触发拟南芥基因的不同特定反应:全基因组表达分析。
Plant Signal Behav. 2006 May;1(3):140-51. doi: 10.4161/psb.1.3.2997.
2
Distinctive core histone post-translational modification patterns in Arabidopsis thaliana.拟南芥中独特的核心组蛋白翻译后修饰模式。
PLoS One. 2007 Nov 21;2(11):e1210. doi: 10.1371/journal.pone.0001210.
3
Epigenetic control of a transcription factor at the cross section of two antagonistic pathways.在两条拮抗途径交叉点处转录因子的表观遗传调控。
Epigenetics. 2007 Apr-Jun;2(2):106-13. doi: 10.4161/epi.2.2.4404. Epub 2007 May 8.
4
The Arabidopsis homologs of trithorax (ATX1) and enhancer of zeste (CLF) establish 'bivalent chromatin marks' at the silent AGAMOUS locus.拟南芥中三体胸苷(ATX1)和增强子(CLF)的同源物在沉默的AGAMOUS基因座上建立了“双价染色质标记”。
Nucleic Acids Res. 2007;35(18):6290-6. doi: 10.1093/nar/gkm464. Epub 2007 Sep 18.
5
Chromatin modifications and their function.染色质修饰及其功能。
Cell. 2007 Feb 23;128(4):693-705. doi: 10.1016/j.cell.2007.02.005.
6
SET3p monomethylates histone H3 on lysine 9 and is required for the silencing of tandemly repeated transgenes in Chlamydomonas.SET3p可使组蛋白H3的赖氨酸9位点发生单甲基化,并且是衣藻中串联重复转基因沉默所必需的。
Nucleic Acids Res. 2007;35(3):939-50. doi: 10.1093/nar/gkl1149. Epub 2007 Jan 23.
7
Involvement of the xyloglucan endotransglycosylase/hydrolases encoded by celery XTH1 and Arabidopsis XTH33 in the phloem response to aphids.芹菜XTH1和拟南芥XTH33编码的木葡聚糖内转糖基酶/水解酶在韧皮部对蚜虫反应中的作用。
Plant Cell Environ. 2007 Feb;30(2):187-201. doi: 10.1111/j.1365-3040.2006.01618.x.
8
Methylation of lysine 4 on histone H3: intricacy of writing and reading a single epigenetic mark.组蛋白H3赖氨酸4位点的甲基化:单一表观遗传标记书写与读取的复杂性
Mol Cell. 2007 Jan 12;25(1):15-30. doi: 10.1016/j.molcel.2006.12.014.
9
Origin of the bacterial SET domain genes: vertical or horizontal?细菌SET结构域基因的起源:垂直遗传还是水平转移?
Mol Biol Evol. 2007 Feb;24(2):482-97. doi: 10.1093/molbev/msl184. Epub 2006 Dec 5.
10
The Arabidopsis SUVR4 protein is a nucleolar histone methyltransferase with preference for monomethylated H3K9.拟南芥SUVR4蛋白是一种核仁组蛋白甲基转移酶,偏好单甲基化的H3K9。
Nucleic Acids Res. 2006;34(19):5461-70. doi: 10.1093/nar/gkl687. Epub 2006 Oct 4.

拟南芥中与三胸蛋白ATX1和ATX2高度相似的同源物编码具有不同生化功能的蛋白质。

The highly similar Arabidopsis homologs of trithorax ATX1 and ATX2 encode proteins with divergent biochemical functions.

作者信息

Saleh Abdelaty, Alvarez-Venegas Raul, Yilmaz Mehtap, Le Oahn, Hou Guichuan, Sadder Monther, Al-Abdallat Ayed, Xia Yuannan, Lu Guoqinq, Ladunga Istvan, Avramova Zoya

机构信息

School of Biological Sciences, University of Nebraska, Lincoln, Nebraska 68588-0118, USA.

出版信息

Plant Cell. 2008 Mar;20(3):568-79. doi: 10.1105/tpc.107.056614. Epub 2008 Mar 28.

DOI:10.1105/tpc.107.056614
PMID:18375658
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2329920/
Abstract

Gene duplication followed by functional specialization is a potent force in the evolution of biological diversity. A comparative study of two highly conserved duplicated genes, ARABIDOPSIS TRITHORAX-LIKE PROTEIN1 (ATX1) and ATX2, revealed features of both partial redundancy and of functional divergence. Although structurally similar, their regulatory sequences have diverged, resulting in distinct temporal and spatial patterns of expression of the ATX1 and ATX2 genes. We found that ATX2 methylates only a limited fraction of nucleosomes and that ATX1 and ATX2 influence the expression of largely nonoverlapping gene sets. Even when coregulating shared targets, ATX1 and ATX2 may employ different mechanisms. Most remarkable is the divergence of their biochemical activities: both proteins methylate K4 of histone H3, but while ATX1 trimethylates it, ATX2 dimethylates it. ATX2 and ATX1 provide an example of separated K4 di from K4 trimethyltransferase activity.

摘要

基因复制后伴随功能特化是生物多样性进化中的一股强大力量。对两个高度保守的复制基因拟南芥类三体同源蛋白1(ATX1)和ATX2的比较研究揭示了部分冗余和功能分化的特征。尽管它们在结构上相似,但其调控序列已经发生分歧,导致ATX1和ATX2基因在时间和空间上呈现出不同的表达模式。我们发现ATX2仅使有限比例的核小体发生甲基化,并且ATX1和ATX2影响的基因集在很大程度上不重叠。即使在共同调控共享靶标时,ATX1和ATX2也可能采用不同的机制。最显著的是它们生化活性的差异:两种蛋白质都使组蛋白H3的K4发生甲基化,但ATX1使其三甲基化,而ATX2使其二甲基化。ATX2和ATX1提供了一个K4二甲基转移酶活性与K4三甲基转移酶活性分离的例子。