Klammer Martin, Roopra Sanjit, Sonnhammer Erik L L
Stockholm Bioinformatics Centre, Stockholm University, 10691 Stockholm, Sweden.
Bioinformatics. 2008 Jun 15;24(12):1467-8. doi: 10.1093/bioinformatics/btn213. Epub 2008 Apr 29.
jSquid is a graph visualization tool for exploring graphs from protein-protein interaction or functional coupling networks. The tool was designed for the FunCoup web site, but can be used for any similar network exploring purpose. The program offers various visualization and graph manipulation techniques to increase the utility for the user.
jSquid is available for direct usage and download at http://jSquid.sbc.su.se including source code under the GPLv3 license, and input examples. It requires Java version 5 or higher to run properly.
Supplementary data are available at Bioinformatics online.
jSquid是一种用于探索蛋白质-蛋白质相互作用或功能耦合网络中的图的可视化工具。该工具专为FunCoup网站设计,但可用于任何类似的网络探索目的。该程序提供了各种可视化和图操作技术,以提高对用户的实用性。
jSquid可在http://jSquid.sbc.su.se直接使用和下载,包括遵循GPLv3许可的源代码和输入示例。它需要Java 5或更高版本才能正常运行。
补充数据可在《生物信息学》在线获取。