Lins L, Decaffmeyer M, Thomas A, Brasseur R
Centre de Biophysique Moléculaire Numérique, Faculté des Sciences Agronomiques de Gembloux, Passage des Déportés, Gembloux, Belgium.
Biochim Biophys Acta. 2008 Jul-Aug;1778(7-8):1537-44. doi: 10.1016/j.bbamem.2008.04.006. Epub 2008 Apr 25.
Physical properties of membranes, such as fluidity, charge or curvature influence their function. Proteins and peptides can modulate those properties and conversely, the lipids can affect the activity and/or the structure of the former. Tilted peptides are short hydrophobic protein fragments characterized by an asymmetric distribution of their hydrophobic residues when helical. They were detected in viral fusion proteins and in proteins involved in different biological processes that need membrane destabilization. Those peptides and non lamellar lipids such as PE or PA appear to cooperate in the lipid destabilization process by enhancing the formation of negatively-curved domains. Such highly bent lipidic structures could favour the formation of the viral fusion pore intermediates or that of toroidal pores. Structural flexibility appears as another crucial property for the interaction of peptides with membranes. Computational analysis on another kind of lipid-interacting peptides, i.e. cell penetrating peptides (CPP) suggests that peptides being conformationally polymorphic should be more prone to traverse the bilayer. Future investigations on the structural intrinsic properties of tilted peptides and the influence of CPP on the bilayer organization using the techniques described in this chapter should help to further understand the molecular determinants of the peptide/lipid inter-relationships.
膜的物理性质,如流动性、电荷或曲率会影响其功能。蛋白质和肽可以调节这些性质,反过来,脂质也会影响前者的活性和/或结构。倾斜肽是短的疏水蛋白片段,其特征在于当呈螺旋状时疏水残基的不对称分布。它们在病毒融合蛋白以及参与需要膜去稳定化的不同生物过程的蛋白质中被检测到。这些肽与非层状脂质(如PE或PA)似乎通过增强负曲率结构域的形成而在脂质去稳定化过程中协同作用。这种高度弯曲的脂质结构可能有利于病毒融合孔中间体或环形孔的形成。结构灵活性似乎是肽与膜相互作用的另一个关键性质。对另一种脂质相互作用肽即细胞穿透肽(CPP)的计算分析表明,构象多态的肽应该更容易穿过双层膜。利用本章所述技术对倾斜肽的结构固有性质以及CPP对双层膜组织的影响进行的未来研究,应有助于进一步理解肽/脂质相互关系的分子决定因素。